Metabacillus rhizosphaerae: WCV66_20705
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Entry
WCV66_20705 CDS
T10831
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrl Metabacillus rhizosphaerae
Pathway
mrl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCV66_20705 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrl03019
]
WCV66_20705 (recQ)
03400 DNA repair and recombination proteins [BR:
mrl03400
]
WCV66_20705 (recQ)
Enzymes [BR:
mrl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCV66_20705 (recQ)
Messenger RNA biogenesis [BR:
mrl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WCV66_20705 (recQ)
DNA repair and recombination proteins [BR:
mrl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WCV66_20705 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
HTH_29
HTH_23
GerE
zf-CXXC
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WXB87624
LinkDB
All DBs
Position
complement(4256332..4258470)
Genome browser
AA seq
712 aa
AA seq
DB search
MLQQAEKQLNDYFGYSSFRKGQEEIIESVLKGNDTLAIMPTGGGKSICYQIPALLMDGIT
IVISPLISLMKDQVDALTSVGIPSTYINSSLSVSELNERISEVKDGVYKILYIAPERIET
QSFRTLLLSMNVSIIAVDEAHCISQWGHDFRPSYRSIKKMISDFVEKPVVIALTATATKE
VTTDICQLLNVSSSNTYVTGFARDNLTFNVIKGENKRDYITKYIKANRDHAGIIYAATRK
EVDDLSQFLKKSGVKVGKYHAGLAEQERADQQDQFLFDQLNVMVATNAFGMGINKSNVRY
VIHHNLPKNIEAYYQEAGRAGRDGEKSECTILFAGQDIQLQKFLIEQTTLSDEKKVHEYQ
KLQQMVDLCHTEKCIQTYIVEYFGESTPSSDCGKCMNCRDTRSKIDVTNEALMVFSCVKR
MDERFGKTLVAQVLKGSKNKRISQFGFGKLSTYGLMKSKTEKQIVDFIDFLIAEGYLALT
NSQFPVLVLSNKARTVIVEKQQVFKKEQVTIESIEANDELFEMLKQVRRELASNLGVPPY
IIFSDSSLKDMSSKCPTTEEDFLEVKGVAKTKLERYGDDFIAAICKYMKIERKTPIKHEN
IIDTQTVESDTSASHFTSYQLYRDGQTIKEICKERGLSEITVQNHLIRAVSEGNPIDWSQ
IVTNEQETIIVEKVFELGTEMLKPLKEALPDDIDYFQIKAMVCKLKLETSYK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttacagcaagctgaaaaacaattaaatgattattttgggtactcttcttttagaaag
ggtcaagaagaaattatagaaagtgttttaaaaggaaatgatacattagcaatcatgccg
actggtggagggaaatcgatctgctatcaaattccagctttacttatggatggcattacg
atcgttatttcaccgttaatctcattaatgaaggatcaagttgatgcacttactagtgtt
ggtattccatcaacttatattaatagtagtttatctgttagtgaattgaatgaacgaatt
tcagaagtgaaggacggagtatataaaattctctatattgctccagagcggattgaaacc
caatcgtttcgtacattacttttatcgatgaatgtctcaataatcgcagttgatgaagct
cactgtatctcacaatggggtcatgatttccgtccaagctatcgaagtattaaaaagatg
ataagtgattttgttgaaaagccagtcgtcatagcattgacagctactgcaacaaaggaa
gttacgactgatatttgtcagttattgaatgtatcttcttcaaatacgtatgtaacaggt
tttgcacgcgataatttaacatttaatgtgattaaaggtgaaaataagcgggattatatt
acgaagtatattaaagcgaatcgagatcatgcgggtattatctatgctgctacgagaaaa
gaagttgatgacttatcacaatttttaaaaaagagtggcgtaaaagtaggcaaatatcat
gcaggattagctgaacaagaacgagctgatcaacaagatcaatttttatttgatcagctg
aatgtgatggtcgcgacaaatgcctttggaatggggatcaataagtcaaatgttcgatac
gtgatccatcataacttaccgaaaaacatagaagcttattaccaggaggctggtcgtgca
ggtcgggatggtgaaaagagcgagtgtaccattttgttcgctggccaggatattcagttg
caaaagtttttaatcgagcagacaacattgagtgatgaaaaaaaggtacacgaataccaa
aagctacaacaaatggtggatctttgtcataccgaaaaatgtattcaaacgtacattgtt
gagtatttcggtgaatctactccatcctctgattgtggtaaatgtatgaattgcagggac
actaggtctaaaatagatgtgacgaatgaggcattaatggtcttttcttgtgtgaaacgg
atggacgagcgattcggtaagacgttggttgcacaagtattgaagggctcaaaaaataaa
cgaatttcccaatttggttttggcaagctatcaacttatggattgatgaaaagtaaaaca
gaaaaacaaatcgtggattttatcgattttcttattgcagaaggatatcttgccttaacg
aattcacaattccctgttttagtgttaagtaataaagcaagaaccgtaatagtagaaaaa
caacaggtatttaaaaaagagcaagtgacaatcgaatctattgaagcaaatgatgaatta
tttgaaatgttgaagcaggtaagacgagaattagcatcaaatcttggggttccaccttat
attattttttcagatagtagtttgaaagacatgagcagcaagtgtccgacaacagaagaa
gattttttagaagtaaagggagttgcgaaaacgaaactagaacgttatggagacgacttt
atagcagcaatttgtaagtacatgaagattgagagaaaaactccaataaaacatgaaaat
atcattgacacccaaactgttgaaagtgatacttcagcaagtcatttcactagttatcaa
ttatatcgtgacggtcaaacgattaaagagatatgtaaggaaagaggactgtctgaaatt
accgttcaaaatcatctaattagagctgttagcgaaggtaatccaatagattggtctcag
atcgttacaaatgagcaggagacaatcatcgtagaaaaagtatttgagcttggtacggag
atgctaaaaccactaaaagaagcacttccagatgatattgactattttcaaattaaggca
atggtttgtaagctgaaattggaaacttcttataaatag
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