Minicystis rosea: A7982_02501
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Entry
A7982_02501 CDS
T04613
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mrm
Minicystis rosea
Pathway
mrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7982_02501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrm03019
]
A7982_02501
03009 Ribosome biogenesis [BR:
mrm03009
]
A7982_02501
Enzymes [BR:
mrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7982_02501
Messenger RNA biogenesis [BR:
mrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7982_02501
Ribosome biogenesis [BR:
mrm03009
]
Prokaryotic type
rRNA helicases
A7982_02501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
YuA_Gp49
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APR77154
LinkDB
All DBs
Position
complement(2853766..2856477)
Genome browser
AA seq
903 aa
AA seq
DB search
MTDITPSPTASPAAPPAADAGPPSRSAATFEVLPLSRELRETLAEIGYTHPTPVQLAVWE
PATRGNDAVVQARTGTGKTAAFGLPIVDHLVRKSMAQVQVLALCPTRELALQVTNEIERL
GKRKNIKVAAIYGGAPMQRQIDQIADGAQVIVGTPGRVLDHLRRGTLDPKHIRLLVLDEA
DEMLSMGFEREVTAILDSLPKERQTLLFSATLPPDIERMAKKLRKPEYVTLSGDHVGALS
IEHFVYFVAGDKLGALIRVIEVENPEGAVVFCNTKDETERVAQALTRQGYDADWLNGDLP
QSDRERVMAKTREGRLRFLVATDVAARGIDISHLTHVINYDFPQDAESYVHRTGRTGRAG
RTGTGISLITPHDVGGLYLLRLTYKIRPIEKQIPSEGELKTRSEADLVSMLAEAFTAIPV
HADDLALARRLLTHENGEAIVAGLLRDHLGARPDAQREATAARKATRVPPKPAAPKPART
ETPRAPKPEEAPTTTPGAQAAPIAAEARTDERPARAEHERREHGRDDRGERRGRGHESHR
NEGERGQRSEGSRFESERGQRGEGERGQRFEGERGQRAEGERGERGQRAEGERGERGQRA
EGERGERGQRAESDRGERGERGQRAEGDRGERGQRAEGDRGERGQRAEGGQRVENERGPR
GRGRDRGERRGRGREEHVPVSAAQGTHEGDPSAVPTRHADFTTWQPPEEEGDDEPILGSE
REARGRRRHAEPRPAPEANAPIISEPTPATEAAPSAEGDVDLAEIYVNIGRREGARAADF
QRILTERAGLDKANVRRIRVRERNAFVSVRREDLATALAALTGATIAGKVASAEQARERG
SEGEASVDAPRPSTEESSAASTEAAAVTDAATTDAATAAPAPEAPTDDDASDAAPTGRTG
GVG
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatcacgccttcccccaccgcttccccggccgctcctcccgccgccgatgcc
ggcccgccgtcccggtcggccgccaccttcgaagtccttcccctgtcgcgcgagctgcgc
gagacgctcgccgagatcggctacacgcaccccacgccggtgcagctcgccgtgtgggag
ccggccacgcgcggcaacgacgccgtcgtgcaagcgcgcaccggcacgggcaagacggct
gccttcggcctgcccatcgtcgaccatctcgtgcgcaagtcgatggcgcaggtgcaggtc
ctcgcgctctgcccgacgcgcgagctggccttgcaggtgacgaacgagatcgagcggctc
ggcaagcgcaagaacatcaaggtcgccgccatctacggcggcgcgcccatgcagcggcag
atcgatcagatcgccgacggcgcgcaggtcatcgtgggcacgcccggccgcgtgctcgat
cacctccgccgcgggacgctcgatccgaagcacatccgcctcttggtgctcgacgaagcc
gacgagatgctctcgatgggcttcgagcgcgaggtcacggcgatcctcgacagcctcccg
aaggagcggcagacgctgctcttctccgcgacgctcccgcccgacatcgagcggatggcg
aagaagctccgcaagcccgagtacgtgacgctctcgggcgatcacgtgggcgcgctctcc
atcgagcacttcgtgtacttcgtcgccggcgacaagctgggcgcgctgattcgggtcatc
gaggtcgagaacccggagggcgcggtcgtcttctgcaacacgaaggacgagaccgagcgc
gtcgctcaagccctcacgcgccagggctacgacgccgactggctcaacggcgatctcccg
cagtccgatcgcgagcgcgtgatggcgaagacccgtgagggccgcctccgcttcctcgtc
gcaaccgacgtggcggcccgcggcatcgacatctcgcacctgacccacgtcatcaactac
gacttcccgcaggacgccgagagctacgtgcaccgtaccggtcgcacgggccgcgccggc
cgcacgggcaccggcatctcgctcatcaccccgcacgacgtcggcggcctctatctgctg
cgcctgacctacaaaatcaggccgatcgagaagcagatccccagcgagggcgagctcaag
acccgctccgaggcggacctcgtgtccatgttggcggaggcgttcacggcaatcccggtg
cacgcggacgacttggcgctggcgcgccgcctgctcacgcacgagaacggcgaggccatc
gtcgcggggctgctccgcgatcacctcggcgcccgccccgacgcgcagcgcgaagcgacc
gcggcccgcaaggccacgcgggtgccgcccaagcctgctgctccgaagcccgcgcgcacc
gagacgccgcgcgcgccgaagccggaggaagcccccaccaccacgcccggcgcgcaggcc
gcgcccatcgctgcggaagcgcgcaccgacgagcgccccgcgcgtgccgagcacgagcga
cgcgagcacggccgcgacgatcgaggcgagcgccgcggtcgcggccacgagtcgcatcgc
aacgaaggtgagcgtggtcagcgcagcgagggctctcgcttcgagagcgagcgcggtcaa
cgcggtgaaggcgagcgcggccaacgcttcgaaggcgagcgcggtcagcgcgccgagggt
gagcgcggtgagcgcggtcagcgcgccgagggtgagcgcggtgagcgcggtcagcgcgcc
gagggtgagcgcggtgagcgcggtcagcgcgccgagagcgatcgcggtgagcgtggtgag
cgcggtcagcgcgccgagggcgatcgcggtgagcgtggtcagcgcgccgagggcgatcgc
ggtgagcgtggtcagcgcgccgagggcggccagcgcgtagagaacgagcgtgggccgcgt
ggccgtggacgggaccgcggcgagcgtcgcggtcgcggtcgtgaggagcacgtgccggtg
tccgcggctcaggggacgcacgagggcgatccgagcgcggtgcccacgcgccacgcggat
ttcaccacttggcaaccgccggaggaagagggcgacgacgagcccatcctcggcagcgag
cgcgaagcgcgcggacgtcgccggcacgccgagccgcgtcccgcgcccgaagccaacgcg
cccatcatcagcgagcccacgcccgcgacggaggccgcgccgagcgcggagggcgacgtg
gacctcgccgagatctacgtgaacatcggccgtcgcgagggcgcgcgggccgctgatttt
cagcggatcctcacggagcgcgccgggctcgacaaggccaacgtgcgtcgcatccgcgtg
cgcgagcgcaacgccttcgtgagcgtgcggcgcgaggatctcgcgacggccctcgccgcg
ctcaccggcgcgacgatcgccggcaaggtcgccagcgccgagcaggcacgcgagcgcggc
agcgaaggcgaggcgtccgtggatgcgccgcgtccgagcaccgaggagagcagcgcggcg
tcgaccgaagcagcggccgtcacggacgcagcgaccacggacgcagccaccgccgcacct
gcgcccgaagcgccgaccgacgacgacgcgagcgatgcagcaccgacgggccgcaccggc
ggcgtgggctga
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