Minicystis rosea: A7982_08392
Help
Entry
A7982_08392 CDS
T04613
Name
(GenBank) Ribonuclease J2 (endoribonuclease in RNA processing)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mrm
Minicystis rosea
Pathway
mrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7982_08392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrm03019
]
A7982_08392
Messenger RNA biogenesis [BR:
mrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A7982_08392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
APR83043
LinkDB
All DBs
Position
9601915..9603510
Genome browser
AA seq
531 aa
AA seq
DB search
MNCLALEQEEGIVVVDCGVTFPHTDLGIDVYHPRFDYLLAREGRLMGVVITHGHEDHIGA
LPYLLGAADVPVYGPPHALELCRARLAEHGFEEADLDLVTVKPGAPFEVGPFAIEPIRVT
HSITDATALAIRTAAGLVIHTGDFKLDPLPPDGELTDEMRLLELGEEGVRLLLSDSTNVD
SPGTSASESEVGDALFEIVAAAKTRVILGVFASNVQRLRVIGEIAQRTRRRICLLGRSVV
NHVRAAETVGKIRWPSDLLVPPDQAASIPRDKLLVIASGTQAERGSALTRLANGTHQHLR
IDPGDVVILSSRIIPGNDRVVYDLMGDLLRAGVELVSRITDRRIHASGHAHRDEQRRMIE
LTRPRAFVPVHGTLHHLFRHAELARGTGVGEVLIAENGDVIEIGESTPPTKAGRAPVGKV
ATFNGDELSDEVLRERAQLGRGGVACVSLVLDRRGALVTAPEIQSRGVLEPQVTGIARKV
QLAVTQAIGNTSTQTRNDDDAVADVARLAARRAIEAHTGRRPMVIVTVSRP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcctggccctcgaacaagaagagggcatcgtcgtcgtcgattgcggcgtcacg
ttcccccacaccgacctcggaatcgacgtctaccacccgcgcttcgattacctcctcgcc
cgtgaagggcggctcatgggtgtggtcatcacccacggccacgaggatcacatcggtgcc
ctcccctacctcctcggcgccgccgacgtgcccgtctacgggccgccgcacgcgctcgag
ctgtgtcgcgcgcgcctcgccgagcatggcttcgaagaggccgatctcgatctggtcacg
gtgaagcccggggcgccgttcgaggtcgggcccttcgcgatcgagcccatccgcgtgacg
cactcgatcaccgacgcgaccgcgctcgccatccgcacggcggccgggctcgtgatccac
accggcgacttcaagctcgatcccttgccgcccgacggcgagctcaccgacgagatgcgc
ctcctcgagctcggggaagagggcgtgcgcctcctgctctcggacagcaccaacgtggac
tcgcccggcacctcggccagcgagagcgaggtgggcgacgcgctcttcgagatcgtcgcc
gcggccaagacgcgggtcatcctcggcgtcttcgcctccaacgtgcagcggctccgcgtc
atcggcgagatcgcgcagcgcacgcggcgccgcatctgcctgctcggccggagcgtcgtg
aaccacgtccgcgccgccgagacggtgggcaagatccgctggccgagcgacctcctcgtg
ccgcccgaccaggcggcctcgatcccgcgcgacaagctcctcgtcatcgccagcggcacg
caggccgagcgcggcagcgcgctcacgcgcctcgccaacgggacgcaccagcacctccgc
atcgatccgggggacgtggtgatcctgtcgagccgcatcatcccgggcaacgatcgcgtg
gtctacgatctgatgggcgacctgctccgcgccggcgtggagctcgtctcgcgcatcacc
gatcgccgcatccacgcgagcgggcacgcgcaccgcgacgagcagcgccgcatgatcgag
ctgacccgaccgcgcgcgttcgtgccggtgcacgggacgctgcaccacctgttccgccac
gcggagctggcccgcgggacgggcgtgggcgaggtgctgatcgcggagaacggcgacgtg
atcgagatcggcgagagcacgccgcccacgaaggcgggccgcgcgccggtcggcaaggtg
gcgaccttcaacggcgacgagctgtccgacgaggtgctccgcgagcgcgcgcagctcggt
cgcggcggcgtggcctgcgtgtcgctggtgctcgaccggcgcggcgcgctggtgacggcg
cccgagatccagagccgcggtgtgctcgagccgcaggtcaccgggatcgcgcgcaaggtg
cagctcgcggtgacgcaggcgatcggcaacaccagcacccagacacgcaacgacgacgac
gccgtcgccgacgtggctcgcctggccgcgcgccgcgccatcgaggcgcacaccggccgc
cgccccatggtcatcgtcacggtgagccggccgtga
DBGET
integrated database retrieval system
