KEGG   Minicystis rosea: A7982_08640
Entry
A7982_08640       CDS       T04613                                 
Name
(GenBank) RecD-like DNA helicase YrrC
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mrm  Minicystis rosea
Pathway
mrm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A7982_08640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mrm03400]
    A7982_08640
Enzymes [BR:mrm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A7982_08640
DNA repair and recombination proteins [BR:mrm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A7982_08640
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 SH3_13 UvrD_C_2 OB_YrrC HHH_5 Viral_helicase1 AAA_11 AAA_22 AAA_16 nSTAND3 AAA_5 HHH PIF1 Helicase_RecD HHH_2 UvrD-helicase NTPase_1 AAA_28 MeaB CATASP Zeta_toxin SLFN-g3_helicase AAA_29 RsgA_GTPase Ploopntkinase3 T2SSE AAA DEAD MoCF_biosynth ABC_tran TsaE CPT NPHP3_N ATP_bind_1 AAA_14 CbiA
Other DBs
NCBI-ProteinID: APR83291
LinkDB
Position
9891715..9893940
AA seq 741 aa
MSQRPLFAAKATLATPGQPTTMEGEVARVTYENDETGFRVLRVNVDGRAQPEVWVGVFRA
VPPGTRVRATGRYERDPRHGEQLKVETLLTIAPSTLEGLERYLGSGMVPGIGPAYAKRIV
ETFGMEALEVLDRSPERLTEVPGLGPRRADAVSKAWEKQRAVGAIMIFLQQHGVSPSLAA
KIYKRFGPRAIDEVSKHPYRLALDVWGVGFKTADRIARSIGVGADAPERAQAGVLQTLHD
VSAKGHTYTPRPELCELAAVMLERDVDAVDEATTALAQSGRIRIERLENGEEAVYPIELH
DAEIRLSQRLAQVLHHEAPGRTLLEGAIGAAIEGFEKRTNVTLAPAQRDAVEQAARHKVL
VVTGGPGVGKTTIVRAMLALFDRARINVRLAAPTGRAAKRMSEATSREAVTLHRLLEFDP
RQRTFARKHGHAIEAGALIVDEASMLDLALADSLLQAISDHARLVLVGDVDQLPSVGPGA
VLRDVIASGRVPTVRLSQIFRQAEGSLIVQNAHRIQTGQPPESAAGPTGEFYVIERKEAE
AAAETIIETVVRRIPARFGLDPKTQVQVLTPMHKGEVGAVVLNERLQQALNPSGPSVTRG
ARTLRLGDKVMQLKNDYDREVYNGDVGYISALDDVERAITVRFDDRDVVYEEGDLDELTL
AYATSIHKSQGSEYPAVVVPILTQHFVMLSRNLIYTAVTRGKKLVVLVADPRAVSLALAE
TRREDRRTHLASRLRTTVDRG
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgtcgcaacggccgctcttcgccgcgaaggccacgctcgcgacgcccggtcagcccacc
acgatggagggcgaggtcgcgcgcgtcacctacgagaacgacgagacgggcttccgcgtg
ctgcgtgtgaacgtcgacggccgcgcccagcccgaggtctgggtcggcgtgttccgcgcg
gtgccgccgggcacgcgcgtgcgcgccaccggtcgctacgagcgcgatccccggcacggc
gagcagctcaaggtcgagacgctgctcaccatcgcgccgtcgacgctggagggcctcgag
cgttacctcggctcgggcatggtgccgggcatcgggccggcctacgcgaagcgcatcgtc
gagacgttcggcatggaggcgctcgaggtcctcgatcgatcgcccgagcgcctcaccgag
gtgcccggcctcggcccgcgccgcgccgacgcggtgagcaaggcttgggagaagcagcgc
gcggtcggcgccatcatgatcttcctccaacagcacggcgtctcgccgtcgctcgcggcc
aagatctacaagcgcttcggtccccgcgcgatcgacgaggtctcgaagcacccgtaccgc
ctcgcgctcgacgtgtggggcgtgggcttcaagacggcggaccgcatcgcgcgatcgatc
ggcgtgggcgccgacgcgcccgagcgcgcgcaggcaggcgtgctgcagacgctgcacgac
gtctcggccaagggccacacatacaccccacgccccgagctctgcgagctcgcggccgtg
atgctggagcgcgacgtcgacgcggtggacgaggcgaccacggcgctcgcgcaatcgggg
cgcatccggatcgagcggctcgagaacggcgaggaggccgtctatccgatcgagctgcac
gacgccgagatccgcctctcgcagcggctcgcgcaggtgctccatcacgaagcgccgggc
cgcacgctgctcgaaggcgcgatcggcgcggccatcgaaggcttcgagaagcgcaccaac
gtgacgctcgcgccggcgcagcgcgacgcggtggagcaggccgcgcgccacaaagtgctg
gtcgtgaccggcggccccggcgtgggcaagacgaccatcgtgcgcgccatgctggcgctc
ttcgatcgcgcgcggatcaacgtccgcctcgccgcgcccacgggccgcgccgccaagcgc
atgagcgaggccacctcgcgcgaggccgtcacgctgcaccgcctgctggagttcgatccc
cggcagcgcaccttcgcgcgcaagcacgggcacgcgatcgaggcgggcgcgctcatcgtc
gacgaggcctcgatgctcgatctggcgctcgccgactcgctgctccaggccatctccgat
cacgcgcggctcgtgctcgtgggcgacgtcgatcagctcccctccgtcggccccggcgcc
gtgctgcgcgacgtgatcgcatcgggccgcgtgcccacggtgcggctctcgcagatcttc
cggcaggccgagggcagcctcatcgtgcagaacgcccaccgcatccagaccgggcagccg
cccgagagcgcggccggccccacgggcgagttctacgtcatcgagcgcaaggaggcggag
gccgccgccgagaccatcatcgagaccgtcgtgcgccgcatccccgcgcgcttcggcctc
gatcccaagacccaggtgcaggtcctgacgcccatgcacaagggcgaggtcggcgccgtg
gtgctcaacgaacgcctgcaacaagcgctcaatccgagcggcccttcggtcacccgcggc
gcgcgcacgctccgcctcggcgacaaggtgatgcagctcaagaacgactacgaccgcgag
gtctacaacggcgacgtcggctacatctccgccctcgacgacgtggagcgcgcgatcacg
gtgcgcttcgacgatcgcgacgtcgtctacgaagagggcgatctcgacgagctcacgctc
gcctacgcgaccagcatccacaagagccagggcagcgagtacccggccgtcgtcgtgccc
atcctcacgcagcacttcgtgatgctctcgcgcaacctcatctacacggcggtcacgcgc
gggaagaagctcgtggtcctggtcgccgatcctcgcgccgtctcgctggccctcgccgag
acccgtcgcgaggatcgccggacccacctggcgtcccgcctccgcacgaccgtcgaccgc
ggttga

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