Minicystis rosea: A7982_10997
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Entry
A7982_10997 CDS
T04613
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
mrm
Minicystis rosea
Pathway
mrm02020
Two-component system
mrm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A7982_10997
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A7982_10997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrm03021
]
A7982_10997
Transcription machinery [BR:
mrm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7982_10997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
LacI
AcaB
Motif
Other DBs
NCBI-ProteinID:
APR85648
LinkDB
All DBs
Position
12543979..12545493
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AA seq
504 aa
AA seq
DB search
MGMEMKLQFKLSQQLVMTPQLVQAIRLLQLSRLELVDEIRKELDGNPVLADDQTDPKRGE
GDDKHSNSAASNEQRLENMERNEREQNDTAARDAEKRAKEVDWEQFLENRQLQQALPSHR
GGFEELPPIEQNLTKPSNLRDHLVWQLQMSDFVENERQFAELVIGNLDEKGYLDLKGGEG
PNGEKIEDLTVQDLAREAELDPDDAEEVLRLIQRFDPIGVAARGLSECLMVQAEVLGFDE
IEKTIINEHLHNVERRNFPAIAKALKIPLEEVYEAVQEIMKLESVPARNFAEVDEKTIAI
TPDVYVIKDADQFVVSDNDKGLQRLYINENLAQKMLKDPKAKEFISEKLRSAQWLIRAIE
QRRRTIIKVTECIVEKQREFLEKGVGYLKPMILRDVAEAVGMHESTISRVTSNKYVHTPQ
GLFELKYFFNSSIHRVADEDIASESVKQAIKKIIAAEDKGNPYSDQAIVKILEDKEGIKI
ARRTVAKYREMLNILSSSKRKKMF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggagatgaagctccagttcaagctgtcccagcagctcgtaatgacgccgcag
ttggtgcaggcgatccgcctcttgcaactgtcgcgtctcgagctggtggatgagatccgg
aaggagctcgacggcaatcctgttctggccgacgaccagacggaccccaagcggggcgag
ggcgacgacaagcactccaacagcgcggcctcgaacgagcagcgtctcgagaacatggag
cgcaacgagcgggagcagaacgacaccgccgcgcgcgacgccgagaagcgcgccaaggag
gtcgactgggagcagttcctcgagaaccgccagctccagcaggcgctcccgtcgcatcgc
ggcggcttcgaggagctgcctccgatcgagcagaacctgacgaagccctcgaacctgcgc
gatcacctcgtgtggcagctccagatgagcgacttcgtcgagaacgagcggcagttcgcc
gagctcgtcatcggcaacctcgacgagaagggctacctcgatctcaagggcggcgaaggg
ccgaacggagagaagatcgaggacctcaccgtccaggacctggcccgcgaggccgagctc
gatcccgacgacgcggaggaggtgctccgcctcatccagcgcttcgatcccatcggcgtc
gcggcgcgcggcctctcggagtgcctgatggtgcaggccgaggtgctcggcttcgacgag
atcgagaagacgatcatcaacgagcacctccacaacgtggagcgccgcaacttccccgcg
atcgccaaggcgctcaagatcccgctggaggaggtctacgaggccgtccaggagatcatg
aagctcgagagcgtcccggcgcggaacttcgccgaggtcgacgagaagacgatcgcgatc
acgcccgacgtctacgtgatcaaggacgccgaccagttcgtcgtcagcgacaacgacaag
gggctccagcggctctacatcaacgagaacctcgcgcagaagatgctgaaggaccccaag
gccaaggagttcatcagcgagaagctgcgcagcgcgcagtggctcatccgcgccatcgag
cagcgccggcggaccatcatcaaggtcaccgagtgcatcgtggagaagcagcgcgagttc
ttggagaagggcgtcggctacctgaagccgatgatcctccgcgacgtggccgaggccgtg
ggcatgcacgagtcgaccatctcgcgcgtgacctcgaacaagtacgtgcacacgccgcag
gggctcttcgagctgaagtacttcttcaactcgtcgatccaccgcgtggccgacgaggac
atcgcctccgagagcgtgaagcaggcgatcaagaagatcatcgccgccgaggacaagggc
aacccctacagcgaccaggcgatcgtgaagatcctcgaggacaaggagggcatcaagatc
gcgcgccgcacggtggcgaagtaccgcgagatgctcaacatcctctcgtcgtcgaagcgc
aagaagatgttttga
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