Minicystis rosea: A7982_13457
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Entry
A7982_13457 CDS
T04613
Name
(GenBank) RNA-2',3'-PO4:RNA-5'-OH ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mrm
Minicystis rosea
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrm03016
]
A7982_13457
Enzymes [BR:
mrm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
A7982_13457
Transfer RNA biogenesis [BR:
mrm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
A7982_13457
Prokaryotic type
tRNA splicing ligases
A7982_13457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
APR88108
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All DBs
Position
15381322..15382566
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AA seq
414 aa
AA seq
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MRPGTMNETSYKVIATNAGVPIKAWTVGVPFEEAAEKQLKNIASLPFIHKWVAVMPDAHQ
GMGATVGSVIATSGAVVPAAVGVDIGCGMIATRTSLRASDLPDDLKAIRSRIEASVPHGR
TDNGGSNDRGAWKHVPARVTDAWTNLAERYQRILDKHPRIGRGPAIEHLGTLGTGNHFIE
ICLDEEDRVWIMLHSGSRGLGNRIGTHFIGLAKREMERFFIHLPDADLAYLPEGTVHFGH
YVEAVGFAQDYAMKNRELMMAAVIEALRGAPELPPFEASVEAVNCHHNYVAREHHYGKDV
LVTRKGAVRAQKGDLGIIPGSMGARSFIVRGLGNAESFCSSSHGAGRTMSRAEARRRFTV
EDHAHATHGIECRKDADVIDETPAAYKPIEDVMKAQRDLVDIVHTLRQVVCVKG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccggcaccatgaacgagacgagctacaaggtcattgcgacgaacgcgggcgtg
ccgatcaaggcgtggacggtgggcgtgccgttcgaggaggcggccgagaagcagctcaag
aacatcgcctcgctgcccttcatccacaagtgggtcgccgtgatgccggacgcgcatcag
ggcatgggcgcgacggtcgggagcgtgatcgcgacgagcggcgcggtcgtgccggcggcg
gtcggggtggacatcggctgcgggatgatcgcgacgcgcaccagcctgcgcgcctcggat
ctgcccgacgatctcaaggcgatccgttcgcgcatcgaggcgagcgtgccgcacggccgc
accgacaacggcgggtcgaacgatcgcggcgcgtggaagcacgtgccggcgcgcgtcacg
gacgcgtggacgaacctcgcggagcgctaccagcgcatcctcgacaagcacccgcgcatc
gggcgcgggcccgcgatcgagcacctcgggacgctcgggacggggaaccatttcatcgag
atctgcctcgacgaagaggaccgcgtctggatcatgctgcactcgggatcgcgcgggctc
gggaaccggatcgggacgcacttcatcggcctcgcgaagcgggagatggagcgcttcttc
atccacctgccggacgcggatctcgcgtacctgccggaggggacggtgcacttcggtcac
tacgtggaggccgtgggcttcgcgcaggactacgcgatgaagaaccgggagctgatgatg
gcggcggtgatcgaagcgctccgcggagcgcccgagctgccgccgttcgaggcgagcgtc
gaggcggtgaactgccaccacaactacgtcgcgcgcgagcaccactacgggaaggacgtg
ctggtgacgcgcaagggcgcggtgcgggcgcagaagggtgacctcggcatcatccccggc
agcatgggcgcgcggagcttcatcgtccgcggcctcgggaacgcggagagcttctgctcg
tcgagccacggcgcgggccgcaccatgtcccgcgccgaggcgcgccgtcgcttcacggtc
gaggaccacgcgcacgcgacccacgggatcgagtgccgcaaggacgcggacgtgatcgac
gagaccccggcggcctacaagccgatcgaggacgtgatgaaggcgcagcgcgacctcgtg
gacatcgtccacacgctgcgtcaggtggtgtgcgtgaagggttga
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