Microbacterium resistens: K8F61_09885
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Entry
K8F61_09885 CDS
T07900
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mrn
Microbacterium resistens
Pathway
mrn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K8F61_09885 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrn03021
]
K8F61_09885 (rpoC)
03400 DNA repair and recombination proteins [BR:
mrn03400
]
K8F61_09885 (rpoC)
Enzymes [BR:
mrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K8F61_09885 (rpoC)
Transcription machinery [BR:
mrn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K8F61_09885 (rpoC)
DNA repair and recombination proteins [BR:
mrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K8F61_09885 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF6894
Motif
Other DBs
NCBI-ProteinID:
UGS25018
UniProt:
A0ABY3RMI2
LinkDB
All DBs
Position
complement(2065633..2069508)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDATTFDELRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEDARHRDLATQENNIRLELKTLGDRRDAKIAERLAKLEEE
LAALEAEGAKADAKKKVKDAAEKEMSQIRKGADEAIAKLERVWEDFRTLEVGALRPEDDV
FHELQDRFGQYFEAHMGAEAIQKRLESFDLAGEAENLRLQIAEGKGQRKIRAIKRLKVVN
SFLETGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAVGEGR
AFGSVSEAILAKDEGTLDLQAKVRIRIPGLTFLEGEAPEGYERHGLVDASLGQAIFNDAL
PKGYPFVREVADKGKLSQIVNKLAEEYPKVETAATLDRIKDAGFYWATRSGVTVALSDIL
TPPNKAEIVAGYEKQAAKVQSQYEKGLTTDAERRQELIKIWTEATDEVQAAMRAHFPQDN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGTR
KGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTSKGLELPIAAVDSTGTLVRDANVE
NSVFARTLAVDVVDEAGTVLATAGEDVGDVLIDKLIDSGVTSIKVRSVLTCDSAVGVCAK
CYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTELF
EARTPKGASPIAEADGRITIEETDKSKKVILTPDNGDEEVVYPVLKRATLLVEDGQHVVV
GQPLQVGTLDPKEVMRVQGARAAQKYLVDGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTTLLPGEMVDFKKYQGINRETVAEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLRRYRDITVEATEEAKSERYPNRI
FASDGAYADGDFGYVDFDAFSTDDITPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgcaacaactttcgatgagcttcgcatcggtctggccaccgccgacgacatc
cgtcgttggtcctacggcgaggtcaagaagcccgagacgatcaactaccgcacgctgaag
ccggagaaggacggcctcttcggcgagcagatcttcggcccctcccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtccgcttcaagggcatcgtgtgcgagcgatgcggcgtg
gaggtcaccaagagctccgtccgccgcgagcgcatgggccacatcgagctcgctgcgccc
gtcacccacatctggtacttcaagggcgtgccctcgcgcctcgggtacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatggtgatctccgtggac
gaggacgcgcgtcaccgcgacctcgccacgcaggagaacaacatccgtctcgagctgaag
acgctcggcgaccgccgcgacgccaagatcgcggagcgcctggccaagctggaggaggag
ctcgccgctctcgaggcggagggcgccaaggccgacgccaagaagaaggtcaaggacgcc
gccgagaaggagatgtcccagatccgcaagggcgccgacgaggcgatcgccaagctcgag
cgcgtgtgggaggacttccgcacgctcgaggtcggcgcgctgcgcccggaggacgacgtc
ttccacgagctgcaggaccgcttcggccagtacttcgaggcccacatgggcgccgaggcg
atccagaagcgcctggagagcttcgacctggccggcgaggcggagaacctgcgcctgcag
atcgccgagggcaagggccagcgcaagatccgcgcgatcaagcgcctgaaggtcgtgaac
tcgttcctcgagaccggcatgagcccggcctcgatggtgctggacgtcgttccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgcgacgtccgacctc
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctccgtcgcctgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtcccgtcaccggcaccggcaaccgcgccctgaag
tccctcagcgacatgctgaagggcaagcagggtcgcttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatcaagcgcctg
atcgacctcggtcactcgcagaacatcaaggccgccaagcgcgccgtggagcgcacgcgc
cccgaggtgtgggacgtgctcgaggagatcatccgcgagcgtccggtgctgctgaaccgc
gcccccaccctgcaccgcctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtctgcgccgccttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcgtgctgatgctc
gcgtcgaacaacatcctgaagccgtccgacggccgtccggtcaccctgccctcgcaggac
atgatcatcggcctccaccacctgaccacggtcaaggagggggcggtcggcgagggccgt
gcgttcggctcggtgtccgaggcgatcctcgccaaggacgagggcacgctcgacctgcag
gcgaaggtccgcatccgcatcccgggtctgaccttcctcgagggcgaggcccccgagggc
tacgagcgccacggtctcgtggacgcctcgctcggccaggcgatcttcaacgacgccctg
ccgaagggctacccgttcgtgcgcgaggtcgccgacaagggcaagctgtcgcagatcgtc
aacaagctggccgaggagtacccgaaggtcgagacggcggccacgctggaccggatcaag
gacgcgggcttctactgggccacgcgctcgggtgtgacggtcgcgctgagcgacatcctc
accccgccgaacaaggcggagatcgtcgcgggctacgagaagcaggccgcgaaggtccag
tcgcagtacgagaagggcctcaccaccgacgccgagcgtcgtcaggagctcatcaagatc
tggaccgaggcgaccgacgaggtccaggccgcgatgcgcgcccacttcccgcaggacaac
accatcaaccgcatggtgtcctccggcgcccgtggtaactggctgcagatccgcaacatc
gcgggtatgcgaggcctggtgaacaacccgaagggtgagatcatcccacgtccgatcatc
tcctcgtaccgcgaggggctgtcggtggcggagtacttcatcgcgacgcacggtacccga
aagggtctggccgacacggctctccgtacggcggactcgggctacctgacccgtcgtctg
gtggacgtctcgcaggatgtcatcatccgcgaggacgactgcggcacgtcgaagggcctc
gagctcccgatcgccgcggtcgactcgaccggcacgctggtgcgcgacgcgaacgtggag
aactccgtgttcgcccgcacgctcgcggtcgacgtcgtggacgaggccggcacggtgctc
gccacggcgggcgaggacgtcggcgacgtgctcatcgacaagctgatcgactcgggcgtc
acctcgatcaaggtccgttcggtgctgacctgcgactccgccgtcggcgtgtgcgcgaag
tgctacggccgttcgctcgccaccggcaagacggtggacatcggcgaggccgtcggcatc
atcgcggcccagtcgatcggtgagcccggtacgcagctgacgatgcgtaccttccacacg
ggtggttcggcgtcggccgacgacatcacccagggtctgccgcgcgtcaccgagctgttc
gaggcgcgcaccccgaagggcgcgtcgccgatcgccgaggcggacggccggatcaccatc
gaggagaccgacaagtccaagaaggtcatcctgacgcccgacaacggcgacgaagaggtg
gtctacccggtcctgaagcgtgcgacgctcctcgtcgaggacggccagcacgtggtcgtg
ggccagcccctgcaggtcggcacgctcgaccccaaggaggtcatgcgcgtccagggtgcg
cgtgccgcccagaagtacctcgtcgacggggtgcagggcgtgtaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcggaaggtcacggtc
gtcgaccacggtgacacgacgctgctgccgggcgagatggtggacttcaagaagtaccag
ggcatcaaccgcgagacggtcgccgagggcaagcgccccgcgtccggccgtcccgagctg
atgggtatcacgaaggcgtcgctcgcgaccgagtcgtggctgtcggccgcgtccttccag
gagacgacccgcgtgctcacgcaggccgccatggagggcaagagcgacccgctggtcggc
ctcaaggagaacgtcatcatcggtaagctcatccccgccgggacgggcctgcgccgctac
cgcgacatcacggtggaggcgaccgaggaggccaagagcgagcgttacccgaaccggatc
ttcgcatccgacggggcgtacgccgacggcgacttcggctacgtcgacttcgacgcgttc
tcgaccgacgacatcacccccggcacctacaactga
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