Melioribacter roseus: MROS_0012
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Entry
MROS_0012 CDS
T02176
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mro
Melioribacter roseus
Pathway
mro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MROS_0012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mro03021
]
MROS_0012
03019 Messenger RNA biogenesis [BR:
mro03019
]
MROS_0012
Transcription machinery [BR:
mro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MROS_0012
Messenger RNA biogenesis [BR:
mro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MROS_0012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA
Fungal_virus_P2_C
S1CSD-TOTE-2
AAA_25
PK_C
Spore_III_AA
AAA_22
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AFN73256
UniProt:
I6ZZV5
LinkDB
All DBs
Position
complement(11489..12736)
Genome browser
AA seq
415 aa
AA seq
DB search
MDISELQSKKIVDLYKIAKEYGLTGYSDLRKQELIFKILEAQSQKDGLTFSKGVLEVLPD
GYGFLRSADYNYLPSPDDIYVSPSQIKRFSLRTGDFVSGQVRPPKEGERFFALLRVEAVN
GKNPEAIRERTLFDNLTPIYPTKRLKLESAPGEYSMRIVDLIAPIGKGQRGLIVSPPKAG
KTILLQKIANSITRNHPEVKIIMLLIDERPEEVTDMQRSVQAEVISSTFDEPAERHVQVA
NMVIEKAKRMVEAGDDVVILLDSITRLARAHNTVIPHSGRILSGGVDANALHKPKRFFGS
ARNTEDGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELVLDRTLADKRIFPAIDINKS
GTRKEELLMTEEELNKVWILRKLLSDFDPTEAMEFLMDKMKGTRNNKEFLASMNS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacatatcagaacttcaatccaaaaaaatcgttgacctctataaaatagcaaaggaa
tacggacttaccggttacagcgatttaagaaaacaggaattaattttcaaaattctcgaa
gcccaatctcaaaaagacggattaactttttccaagggcgtactcgaagtactgcccgac
ggttacggattcttgcgttcggcggattataactacttgccttctccggacgatatttat
gtatcgccttctcaaattaagagattcagtttgagaacgggagattttgtaagcggtcag
gtgagacctcccaaagaaggcgaacgattctttgctcttttaagagtcgaagccgtcaac
ggtaaaaatcccgaagctatcagagaacgtacgctcttcgataatcttactcccatttat
cctaccaagagattaaagctcgaatcggctccgggcgaatattcgatgagaattgtcgac
ctgatagctcccattggaaagggacagagaggattgattgtatctccgccgaaagccggt
aaaacaatcctgctccaaaaaattgcaaactcgattacgagaaatcatcccgaagtaaaa
ataattatgcttttgattgacgaacgcccggaagaagttaccgacatgcaacgttccgtg
caggcggaagttatcagttcgactttcgacgaacccgcagaacgtcacgttcaggtggcc
aacatggtaattgaaaaagccaagagaatggtcgaagccggagacgacgttgttatattg
ctcgacagtattactcgtctggctcgcgctcacaatactgttattcctcacagcggaagg
attttgtcgggcggcgtcgacgcaaatgctcttcataaaccgaaaagatttttcggatct
gcccgaaataccgaagacggaggcagccttactataatcgcaacggcgctgatcgacacc
ggaagcagaatggacgaagttattttcgaagaattcaaaggcaccggtaatatggaattg
gttctcgaccgcacattagccgacaagagaatattccccgctattgatattaataaatcc
ggcacgcgtaaagaagaattgcttatgaccgaagaggaactcaacaaggtttggatactt
cgcaaacttctttcggatttcgatcctacggaggcaatggaattcctgatggataaaatg
aaaggaacccgaaataataaagaattcttagccagtatgaacagttaa
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