Melioribacter roseus: MROS_0087
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Entry
MROS_0087 CDS
T02176
Name
(GenBank) Carbohydrate binding module (family 6)
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mro
Melioribacter roseus
Brite
KEGG Orthology (KO) [BR:
mro00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MROS_0087
Enzymes [BR:
mro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
MROS_0087
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
Por_Secre_tail
FG-GAP
FG-GAP_3
CHU_C
CBM_6
Motif
Other DBs
NCBI-ProteinID:
AFN73331
UniProt:
I7A023
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All DBs
Position
complement(106993..110046)
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AA seq
1017 aa
AA seq
DB search
MKFLMRVILYVNIVLTGASINIIGQSFQHENLDRGVVAVPAENGGIYIGWRLLADDPDSI
KFNVYRGDIKINDIPVESSTNFVDSTGTLNDKYKIVSVIDGTELNASEEVTPWENLYKTI
PLQRPQGGRTPDGVDYTYSPNDASVADLDGDGQYEIVLKWDPSNSKDNSQSGYTGNVYLD
GIELDGTLLWRIDLGRNIRAGAHYTQFMVYDLDGDGRAELACKTADGAIDGEGNVIGDPN
ADYRNSSGYILSGPEYFTIFDGMTGKALATTDYLPPRGNVSLWGDSYGNRVDRFLACVAY
LDGERPSVVMCRGYYTRTVLAAWDWRDGQLTSRWIFDTNNGYPAYAGQGNHNLSVADLDG
DGKDEIVYGAMAVDDDGTGLWNSRLGHGDALHVSDIDPNRPGLEVWGIHENAQVGSALLD
GKTGEIIWGTGPADVGRGVSANLDDSYEGMECWGGTDGLRSATNLKVGPNPPSSNFVVWW
DGDLERELLDNNNIRKYNGSNNPVLLLANGCSSNNGSKATPSLQADLFGDWREEVIWRTS
DNNSLRIYTTNIKTDYRLVTLMHDRQYRLAIAWQNVGYNQPPHTSFFVGKSMLIPDRLKP
PSKPMNLRGVSLGDTVLIEWDSNVEADLAGYILYKGKSPHDFLDSLDVGNVTSYLDTNVT
YDTTYYYALRAYDTDGNKSDLSDIITVTPTLRPDAPAGVSYRYDNNSCLLLWKYDDIDLI
SHVNIYRSESIDMSDPVKFKLDKNFTSYVDKNLIKGKTYYYTLTVTDTNNAESFHTDIIQ
ITPADSFVFQSEDANLIGSVFVENNHLGYHGAAFTNFDASNSAVEFTNMPGFGGGPRALL
FRYALGNTDRTGSLIVNGQATNLTMKGTGDWTNYVTDSVEVNLNSGYDNTIRFSATGSDF
GNLDEIIIKSTPLTSVETVSELPAEFLLYQNYPNPFNPSTVITYTIPATVKSGASGIHVM
LRVYDALGRRVATLVNEQKEPGNYRIEFNADNLPSGIYFYQLLAGNFISTKKMILLR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttaatgagggtcatcttatatgttaatattgttctgacaggcgcgtcgatt
aacattatcggacaatcttttcaacacgaaaatctggataggggagtcgtagccgttccg
gctgaaaacggggggatttatatcgggtggcgattacttgccgacgacccggatagcata
aagtttaatgtctacagaggggacataaaaattaacgatatacccgtagaatcgtcaacg
aattttgtggattcgacgggaactttgaacgataagtataagattgtttctgtaatagat
ggaaccgaattaaacgcttctgaagaagttacgccgtgggaaaatctttataaaacaatt
ccgctccaacgccctcagggcggaagaactccggacggagttgattatacgtacagtccc
aacgacgcaagcgtagccgatctggacggagacggacaatatgaaattgtattgaaatgg
gatccgtcaaattcaaaggataattcgcaaagcggttatacggggaatgtatatctggac
ggtatcgaattggacggaacgctgctctggcgaattgatttgggaaggaacattcgtgcg
ggcgctcattatacgcaatttatggtttatgacctcgacggcgacggacgggctgaattg
gcttgcaaaacagccgacggcgctatcgacggagaaggcaatgtcattggagatccgaac
gcagactacagaaattcaagcggttatattttgtcgggtccggaatactttacgattttt
gacggtatgacaggcaaggctctggcaacgacggattatctgccgccgagaggcaacgtc
agtttatggggagattcatacggcaacagagtcgatcgatttttggcatgcgtggcttat
ctggacggcgaacgtccgagcgttgtaatgtgccgcggttattatacgcgcaccgttctg
gctgcctgggactggcgggacggacaattaacttcccgctggattttcgatactaataac
ggatatccggcttatgccgggcaaggcaatcataatttgagcgtagccgatctggacggc
gacggtaaagacgaaatcgtatacggcgccatggctgtcgacgacgatggaacaggtctg
tggaattcaaggctgggtcacggcgacgctttgcacgtttccgatatcgatccgaatcga
ccaggattggaagtctggggaattcacgaaaatgcgcaagtcggctccgcattactcgac
ggtaaaacgggcgagataatctggggcacaggaccggctgatgtcggaagaggcgtatcc
gcgaatctggacgactcgtatgaggggatggaatgctggggaggaaccgacggattgaga
agcgctacaaatcttaaagtaggaccgaatcctccgtcttccaactttgttgtctggtgg
gatggcgacctcgagcgcgaactcctcgataataataatatccgtaaatacaacggcagt
aataatccggttttgcttttggcaaacggatgctcgtcgaacaacggctcaaaagccact
ccttctttgcaagccgatttattcggagattggcgcgaggaagttatatggcgtacgagc
gacaataattcgttaagaatttatacgacaaatattaaaaccgattacagacttgttact
ttaatgcacgacaggcaataccgtctggcaattgcctggcagaacgtcggttataaccaa
ccgcctcacacaagtttttttgtcggtaagagtatgcttattccagacagattaaaaccg
ccgtccaaaccgatgaatttgcgaggcgtttcgttgggtgatacggtgttgatagaatgg
gattcgaacgtggaagccgatcttgccggctatattctttacaaaggcaaatcgcctcat
gattttttagattcgcttgacgtgggcaatgttacatcatatctcgacacaaatgttaca
tacgatacaacttattattatgctttgagagcgtacgacacggacggcaacaaatccgat
ttatccgacattattacagtaacgcccacgttaaggccggacgctcctgccggagtgtcg
tatcgatacgataataattcttgtttgctgctctggaagtatgacgatattgatttaatc
tcccatgttaatatttacaggtcggaatctatcgatatgtctgatccggtaaaattcaag
cttgataagaattttacatcgtatgtggataaaaatttaatcaaaggaaaaacttattac
tacactttaacggttaccgataccaataacgccgaatcttttcatacggatataatacaa
attacgccggcggattcttttgtgtttcaatccgaggacgctaatttgattggaagcgtc
tttgtggaaaataatcatttggggtatcacggggctgcattcacgaattttgacgcaagt
aacagcgccgttgaatttacaaatatgccgggtttcggcggcggaccccgagccctgtta
ttccgttatgcattgggaaatacagacagaacgggaagtctgatcgttaacggccaggca
actaatctcactatgaaaggcacgggagattggaccaattatgtgacggatagcgtcgag
gttaatttgaattcagggtatgacaatacaattcgtttctctgccaccggttccgacttt
ggaaatcttgatgaaataattattaaatcgactcctcttacatccgtcgaaacggtatcg
gaattaccggcagaatttttgctctaccagaattatccgaatccttttaatccttctacg
gttatcacttatacaatacctgcgaccgtgaaatccggcgcctctggaatacatgtaatg
ctgcgtgtttatgacgcattgggacgccgggttgcaactctggttaatgaacagaaagag
cccggtaattacaggattgaattcaatgcggataatttaccaagcggtatctacttttat
caattgttggcaggcaattttatttctacaaaaaagatgattctgctgagataa
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