Melioribacter roseus: MROS_1924
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Entry
MROS_1924 CDS
T02176
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mro
Melioribacter roseus
Pathway
mro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MROS_1924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mro03019
]
MROS_1924
03400 DNA repair and recombination proteins [BR:
mro03400
]
MROS_1924
Enzymes [BR:
mro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MROS_1924
Messenger RNA biogenesis [BR:
mro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MROS_1924
DNA repair and recombination proteins [BR:
mro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MROS_1924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AFN75156
UniProt:
I7A5I6
LinkDB
All DBs
Position
complement(2248587..2251130)
Genome browser
AA seq
847 aa
AA seq
DB search
MKPEKILKEFFGYENFRPGQKEIIDSILEGRNTLAIMPTGGGKSICYQIPALLSDSLSIV
ISPLISLMKDQVDSINQKEEVAAYINSSIDPKEIYSTYRNIDSGKIKLLYVAPEKLDNKD
FTEKIRSVKPAFLFVDEAHCISEWGHNFRPSYRKIKEFGEYVGIAKISAFTATATEDVRE
DIVAQLGMKNPRVFVYGFERSNLHLNVIRTLRKKETLLKILNENGKPAIVYTATRRYTEE
LAKFLTDNGVVSSYYHAGLTTEMRKIIQDDFISGRTQTIIATNAFGMGIDKSDIRTIVHY
NIPGNLENYYQEIGRAGRDGKPSNIFLLYDEQDVNIQEYFINNSFPNRSQVELVYNSICD
HHKIALNTFPDKPARLEPALIAYLEKQKINKALLESSLKILEKSGYMKPDKSNSSKYYVA
IPHTYEKIDSFAKKLEDNELKDLLYLLAKLYKEKIFVRKTEISIKKLSEIIGATEKEIAE
NLELLDRSGIINFTRPTLHVEIKFIKERLRNDLLKFDFSDNERLIKHHRTKLQRMIDYAH
TNDCRMKFILDYFGEKNDNYECGKCDNCTNVKIALSDNDYIKGHILSVLREYNNPLHTQT
LTKILTGADPNYSNYASYASCAHFAAWEIEDSITDLQNENKIECKNGLVKLKVAIKRDDL
NDYESRLILLNKLKEIRKEASQKFNQPAYMICPDDVLIEIARRKPSSYSELMSIRGFTKY
MYNKLGEEILSVIKTAEEENSLDKKLSEKNLPQNFRKIYELVQKRYSLRDMSSITGLPES
VISVQLETLIGILPELETDYLFDKGELELINEKINEGIRDIKNLYKIFEGKISYSKLRIA
LARKGFS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgaaaagatactaaaagaatttttcggttacgaaaattttcgacccggtcaa
aaagaaataatcgactcgatactagaaggcagaaatacgctggcaataatgccgacaggc
ggaggcaaatcgatttgctatcagatccccgctcttctttccgattccctttcgatcgta
atttcgccgcttatttcattgatgaaagaccaggtcgattcgattaatcaaaaagaagaa
gtcgccgcttacattaacagctccatcgacccaaaagaaatttattcgacctatcgcaat
atagattcgggaaaaattaagctgctctatgtcgcgcccgaaaaattagacaataaagat
ttcaccgaaaaaatcagaagcgttaaacccgctttcctctttgtcgacgaagcccattgc
attagcgaatgggggcataatttcagaccaagttaccgaaaaataaaagaattcggcgaa
tacgtcggcatcgcgaaaatttccgcctttacggctaccgcaaccgaggatgtacgcgaa
gatatagtcgcccaattggggatgaaaaatccgcgagtttttgtctacggtttcgaaaga
agcaatctgcatcttaatgtaatacgaaccctcaggaaaaaagaaacgcttttgaagata
ctcaacgagaacggcaagcccgcaatagtctataccgctactcgcaggtacaccgaagaa
ctggcaaaatttctgaccgacaacggcgtcgtctcttcatactaccacgcgggtttaacc
accgaaatgagaaaaatcattcaggacgactttataagcggcagaacgcaaactataatt
gccacaaatgcattcggcatgggcattgacaaaagcgacatcagaacaatcgtgcattac
aatattcccggcaatcttgaaaattattaccaggaaatcggcagagccggcagggacggc
aagccttcaaatatttttttattgtacgacgaacaagacgtcaatattcaggaatatttc
atcaataattcttttcccaatcggagccaggtcgaattggtttataattcaatttgcgac
caccataaaatagctctgaatacattccccgacaaaccggcgcgattggagcccgcccta
atcgcttatctcgaaaaacaaaagattaacaaagcgcttctggaatcttctctaaaaatt
ctggaaaaatccggctatatgaaaccggataaaagcaattcgagtaaatattatgttgca
atacctcacacatacgaaaaaatcgatagcttcgcaaaaaagcttgaagacaacgaactt
aaagatctgttgtatctgctggcaaaactttataaagaaaaaatatttgttcgtaaaacc
gaaatcagcataaaaaaattgtcggaaattattggcgcaacggaaaaagaaattgcggaa
aatctcgaacttctcgatcgaagcggcataattaattttacgagacctaccctccatgtt
gaaatcaaatttattaaagaaaggcttcggaatgatctgctgaagttcgacttttcggac
aacgaacgcctgattaaacaccaccgcacgaaattgcaacgaatgatagactatgcgcat
actaacgactgccgtatgaaattcatactggattacttcggcgagaaaaacgataattac
gaatgcggcaagtgcgataactgcacaaacgtaaaaatcgcgctatccgacaacgattat
ataaagggacatattctcagcgtattgagagaatacaacaatcctttacatacgcaaacg
ctaacaaaaatattaacgggcgccgatcctaactacagcaattacgcttcgtatgcctca
tgcgctcattttgccgcctgggaaatcgaggactcgattaccgatttgcaaaacgaaaat
aaaatcgagtgcaagaacggacttgtaaaattaaaagtcgccattaaaagagacgatttg
aacgattacgaatcccgtttgatccttttgaataaattgaaagaaatacggaaagaagcc
tctcaaaaattcaatcagcctgcatatatgatttgtcccgacgacgttttgattgaaata
gcccgtcgcaaaccatcgtcttattcggagttgatgtcgatacgcggattcacaaaatat
atgtacaataaattgggagaagaaattctgtcggtaattaaaaccgcagaggaagaaaat
tctttagataaaaaactttccgagaaaaatcttcctcaaaacttccggaaaatttacgag
ctcgttcaaaagagatattctttaagagacatgtcgtcgataaccggtttgccggaatcc
gtaatctcagttcagctcgaaactttaatcgggatattgccggaactggaaacggattat
ctcttcgataaaggcgagctcgaacttatcaatgaaaaaattaacgaggggatacgagac
attaaaaacctgtataaaatttttgagggaaaaatcagttattccaaattgcgaatcgct
cttgcccggaaaggattcagttaa
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