Mucilaginibacter robiniae: HH214_20965
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Entry
HH214_20965 CDS
T08554
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrob
Mucilaginibacter robiniae
Pathway
mrob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HH214_20965 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrob03019
]
HH214_20965 (recQ)
03400 DNA repair and recombination proteins [BR:
mrob03400
]
HH214_20965 (recQ)
Enzymes [BR:
mrob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH214_20965 (recQ)
Messenger RNA biogenesis [BR:
mrob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HH214_20965 (recQ)
DNA repair and recombination proteins [BR:
mrob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HH214_20965 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
CsgE
Motif
Other DBs
NCBI-ProteinID:
QJD98507
UniProt:
A0A7L5E7Y8
LinkDB
All DBs
Position
complement(4779593..4781785)
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AA seq
730 aa
AA seq
DB search
MEIKKSLFDNLQNFFGFDNFKGEQEAIITNILAGNDTFVIMPTGGGKSMCYQLPALMTEG
TAIVISPLIALMKNQVDQLRAFCNSDSVAHFLNSSLTKSETARVKEDVLAGKTKLLYVAP
ESLTKQDNIDFLRLNKLSFVAVDEAHCISEWGHDFRPEYRKIRQVISNLGENIPIIALTA
TATPKVQHDIQKNLQMNNATVYKSSFNRANLYYEVRAKRNVLKEIIKFIKQNAGKSGIVY
CLSRKKVEEVAEALNLNGIKALPYHAGLDAKVRAETQDKFLMEEVEVIVATIAFGMGIDK
PDVRYVIHHDVPKSMEGYYQETGRAGRDGGEGVCVSFYSEKDVDKLQKFMKDKPVSEREI
GTQILKEVIDYAESSVCRRKQILHYFGEDYDASSCNSMCDNCASQRQFFDGEAQLHRALS
LIKQLGEKFDDHHVVSVLMGQDGPQVHHYDHHSLSVFGSGKEDGENLWKSLLRQALLDNF
LSKDIDQYGLLRLTDKGHDFLENPYSIRFVLNKPIEAADDDDTEEGPKQGSGALDTQLLQ
MLKDLRKKIAKQKNVPPFVVFQDPSLEEMCTHYPVSTDELKQISGVGAGKASKFGAPFIE
LIKKYVEDNDIDRPVDMVIKSAANKSALKVYIIQNIDRHLDLEDIAASKGLNYEEILREV
ESIVNSGTKLNLNYYIDEVIDEDKQDEVYDYFRSAEVDSIDDALVDLGVNDYTREEIQLM
RIKFMSELGN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
attgaaattaaaaaatcgctcttcgataacctgcaaaattttttcggatttgataatttt
aaaggcgaacaggaggcgattattaccaacatacttgccggtaatgatactttcgtgatt
atgccaaccggcggcggcaaatcaatgtgttaccaactgcccgccttaatgactgaagga
accgcaattgttatatcgccgctgatagccttaatgaaaaatcaggttgaccaactgagg
gcattttgtaattctgacagcgtagcgcatttcttaaattcatctttaacaaaatcagaa
acagccagagttaaagaagacgtactggctggtaaaaccaaactgttatacgtagctccc
gaatcattaactaaacaagacaatattgactttttacgcctgaataaactatcattcgtt
gctgttgatgaagcacattgtatttcagaatggggacatgatttcagaccagaataccgt
aaaatacgccaagtaataagcaatttaggtgaaaatatcccaattatagctctaacggct
actgcaacgccaaaagttcagcacgatattcagaaaaacctacaaatgaataatgccacg
gtttacaaatcatcctttaaccgggcaaacttgtactatgaagtgcgtgccaagcgcaac
gtgttaaaagagattatcaagtttattaagcagaatgctggcaaatcaggtatcgtatat
tgcctgagccgcaagaaagtagaagaagtagccgaagcattaaacttgaatggtattaag
gcactgccttaccatgcgggcttggatgccaaggtgcgtgccgaaacgcaggacaaattc
ctgatggaagaggtggaagtaattgtagctaccattgccttcggtatgggtattgataag
ccagatgttcgttatgtaatacaccatgatgtgcctaagagtatggaagggtactatcag
gaaaccggacgtgccggacgtgatggtggtgaaggggtatgtgtgtctttctactctgaa
aaagatgtagacaagctgcaaaagtttatgaaggataaaccagtttcagaacgcgaaatt
ggtacacagatattaaaagaagtaattgattacgctgaatcatctgtatgtcgtcgtaaa
cagatactgcattactttggggaagattatgatgcttcaagctgtaatagcatgtgcgat
aattgtgcctcacaacgtcagttttttgatggtgaagctcaactccatcgagcccttagc
ttgattaaacaactaggagaaaagtttgacgatcaccatgtcgtaagcgtattaatggga
caggatggtccgcaggtacatcattatgaccaccattcacttagcgtgtttggatcaggt
aaagaagatggtgaaaacttatggaaatcactgctacgccaagctttattagacaacttc
ttgtcaaaagatattgatcagtatggtttattacgcttaaccgataaggggcatgacttt
ttagaaaacccctacagcattcgttttgtattgaacaaacctattgaagcggctgatgat
gatgatacagaagaaggccctaaacaaggtagtggcgcactagatacgcagttgctgcaa
atgctgaaagatttgcgcaagaaaattgccaaacaaaagaatgtaccaccatttgtcgta
ttccaggatccttcgttagaagagatgtgtacgcattatccggtatcaaccgatgagttg
aaacagatatctggcgttggtgctggcaaggcttccaagtttggtgcgccttttattgag
ctgattaaaaagtatgttgaagataacgacattgatcgcccggtagatatggtgattaag
agcgctgccaacaaatcggctttgaaagtttacattatccagaatattgaccgtcattta
gatttagaagatattgcagcttctaaaggattgaattacgaggaaattttgcgtgaggta
gaatctattgttaactcaggtactaaattgaacctgaactattacattgatgaagtaatt
gatgaagacaagcaggatgaggtgtatgactacttccgttctgccgaggtagattctata
gatgatgctttggttgacttaggtgtaaacgattatacccgcgaagaaatacaactgatg
agaattaagttcatgtcagagctagggaactag
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