KEGG   Methylocystis rosea: EHO51_00600
Entry
EHO51_00600       CDS       T05721                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mros  Methylocystis rosea
Pathway
mros03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mros00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EHO51_00600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mros03019]
    EHO51_00600
Messenger RNA biogenesis [BR:mros03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EHO51_00600
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AZG75362
UniProt: A0A3G8M2K1
LinkDB
Position
141714..143384
AA seq 556 aa
MTTPDADLVFVPLGGLGEIGMNMALYGYGPPKARKWLMVDCGLGFPGPEAPGVDLVFADI
AFVEKIARDLVGICITHAHEDHIGGLATLWPRLKCRVFATPFAAGLLEVRRLNEPGAPKI
DISLTHAGAKLDLDPFQVEYVAVAHSIPEANALAIRTPLGLLLHTGDWKIDPQPGVGTRI
DEARLRALGDEGVTALICDSTNILREGDSFSEADVARTLRTLIAEAPGRVLVTTFASNIA
RLRGIGEAAQACGRTVVVAGRAMDRAIQVARDCGYLDGLPGFHAPELLPTLPRDKTVVIA
TGSQGEYRAAMARAAVNEHPAIKLVAGDRVIFSSRVIPGNARDVFRVINALCDIGVEVIT
DHDHLVHCSGHPRRGEVRQMYEWIRPQIAVPAHGEAHHLTAHAAFAKSHGVSQVVSARNG
DIVRLAPGAPGIIGKAPHGRLMKDGDVVLTEDDGAVRDRLRLSATGVISIALAVDRKGEL
VGDPDVVFAGVPKRGKFGEEMGEVIDEALFAAFEGLSRPRRRDADAVSKAIERAVRGAVS
SVWGKKPTVHVMVVAT
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgacgacgccggacgcggacctcgtcttcgtgccgctcggcggcttgggcgaaatcggc
atgaacatggcgctctacggctacgggccgccgaaagcgcgcaaatggctgatggtcgac
tgcggcctcggatttccgggacccgaggcgcccggcgtcgacctcgtcttcgccgacatc
gccttcgtcgagaagatcgcgcgcgatctcgtcggcatttgcatcacccatgcgcatgag
gatcatatcggcgggctcgcgaccttatggccgcggctcaaatgcagggtgttcgccacc
ccctttgcggcgggcctccttgaagtgcggcggttgaacgaacccggcgcgccgaagatc
gacatttccctgacgcatgccggcgcaaagctcgatctcgatccgttccaggtcgaatat
gtcgcggtcgcgcattcgattccggaagcgaatgcgctcgcgatccgaacgccgctcggc
ctgctgctccacaccggcgactggaagatcgatccgcagcccggcgtcgggacgcgcatc
gacgaggcgcggctccgcgcgctcggcgacgagggcgtcacggcgctcatctgcgactcg
accaacatcctgcgcgagggcgacagtttttcggaagccgacgttgcgcgcacgttgcgc
acgctgatcgccgaagccccgggccgggtgctggtcacgaccttcgcgtccaatattgcg
cggctgcgcggcatcggcgaagcggcgcaggcctgcgggcgcaccgtcgtcgtcgccggg
agggcgatggatcgcgccatccaggtcgcgcgagattgcggctatctcgacgggctcccc
ggatttcacgcgccagaattgctgccgaccttgccgcgcgacaagaccgtcgtcatcgcg
accggaagccagggcgagtaccgcgccgccatggcccgggcggcggtgaacgaacatccg
gcgatcaagcttgtcgcgggcgatcgggtgatcttctcctcgcgcgtcattccgggaaat
gcgcgcgacgtctttcgcgtcatcaacgctctttgcgacatcggcgtcgaggtcatcacc
gaccacgaccacctcgtgcattgctccggccatccgcgccgcggcgaagtcaggcaaatg
tacgaatggatccggccgcagatcgccgtgccggcccatggcgaggcgcatcatctcact
gcgcatgcggccttcgccaagtcgcatggcgtttcgcaggtcgtctcggcgcgcaatggc
gacatcgtaagactggcgccgggcgcgccgggcatcatcgggaaggccccgcacggccgt
ctgatgaaggatggcgacgtcgtcctgaccgaagacgacggcgccgtgcgtgaccgcttg
cgcctctctgccaccggcgtcatttccatcgcgctggcggtcgaccgcaagggcgagctt
gtcggcgatccggacgtcgtcttcgctggggtgccgaaacgcggcaaattcggcgaggag
atgggcgaagtcattgacgaggcgctctttgcagctttcgagggactgtcgcgtccgcgg
cgccgcgacgccgacgccgtttcaaaggcgatcgagcgcgccgttcgcggcgccgtatcg
tccgtctggggcaagaagcccacggtgcatgtgatggtcgtggccacctga

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