Methylocystis rosea: EHO51_05050
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Entry
EHO51_05050 CDS
T05721
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mros
Methylocystis rosea
Brite
KEGG Orthology (KO) [BR:
mros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mros03019
]
EHO51_05050 (hrpB)
Enzymes [BR:
mros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EHO51_05050 (hrpB)
Messenger RNA biogenesis [BR:
mros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EHO51_05050 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZG76152
UniProt:
A0A3G8M4W9
LinkDB
All DBs
Position
1060566..1063154
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AA seq
862 aa
AA seq
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MLHDRSALPIDDVLPAIRAALEASCNLVVVAPPGAGKTTRAPLALLDADWAKGGKLILLE
PRRLAARAAASRMAATLGETVGETIGLRMRLESKISGRTRIEVVTEGVFARMILDDGGLE
GVAGVLFDEYHERSLDADLGLALALDAQAGLREDLRLITMSATLDGARVAALMGAQTIES
QGRAFAVETRYLGRDANARIEESMTRAILLALREERGSILAFLPGQGEIARVASRLAESR
LPDDIDVAPLYGALDRGEQDLAIAPARPGRRKIVLATSIAETSLTIEGVRIVVDSGLARV
QRFEPDLGLSRLETVRASRASVDQRRGRAGRTEPGVCYRLWDEPQTAALPAFAAPEILDA
DLSGLALDLAAWGVSDPGRLKWLDPPPAPAWKEAVALDRELGALDDDGRLTDMGRAMRAL
PLAPRLARMVVEAAGQGEAKRAAELAMLLSERGIGGADADLSHRLERLRGEKSKRAGDAL
RLAAQWARQAMAAAGVLPPPQPSPANAGEGVDSALHQERANRRSFASPLPRSGGGLGRGL
LSDGALIALAFPDRIAKSRGARGEFLMANGRAAMLQFEDPLSRAPFLAVAELTGRAAQAR
ILAACALTAEEVETIAGNRIETRDETVFDAASASLRRRAFRRLGAIRLSERNLAVEPSDQ
NARILARGVAAVGVARLPWTKTQMQRRDRVAFLRRAEGDEWPDLSDAALAASAEEWLAPF
IEGRTSLADIATDDLEAALAQLLPYELSRRLDAEAPSHFETPAGSRHALDYSTENGPILA
VRVQELYGLSSHPTLARGRAPLTLELLSPAHRPIQTTRDLPSFWKGSWSEVKKEMRGRYP
RHLWPDDPAAAQPTTRAKPRGS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatgatcgttctgcgctgccgatcgacgatgtgctgccggcgatccgcgcggcg
cttgaggcgtcgtgcaaccttgtcgtcgtcgccccgcccggcgccggtaaaaccacgcgc
gcgccgctcgcgctgctcgacgccgactgggccaagggcggcaagctcattctattggag
ccgcgacgtctcgccgcccgcgcggcggcgagccgcatggcggcgacgctcggcgagacc
gttggcgaaacgatcggcctgcggatgcgccttgaatcgaaaatctcggggcgaacgcgc
atcgaggtcgtcaccgaaggcgtgtttgcgcggatgattctcgacgatggggggctcgag
ggcgtggccggcgtgctgttcgacgaatatcacgaacgctcgctcgacgcggatctcggc
ctcgcgctggcgctcgacgcccaggcaggactgcgggaggatctgcggctcatcaccatg
tcggcgacgctcgacggcgcccgcgtcgccgcgctgatgggcgcccagacgatcgagagc
caggggcgcgcatttgccgtcgagacgcgctatctcggccgcgacgccaatgcgcgcatc
gaagagtcgatgacgcgcgcgattcttctggcgctgcgcgaagagcggggttcgattctc
gcgtttctgccagggcagggggagatcgcgcgcgtcgcctcacgcctcgccgagtcgcgc
ctgccggacgacatcgacgtcgcgccgctctatggcgcgctcgatcgcggcgagcaggac
ctggccatcgcgccggcgcggcccggccgtcgcaagatcgtgctcgccacgtcgatcgcg
gaaacctcgctgacgatcgaaggcgtgcgcatcgtcgtcgacagcgggctggcgcgcgtg
cagcgcttcgaaccggatctcggattgtcgcggctcgagacggtgcgcgcttcgcgcgcc
agcgtcgatcagcgccgcggccgcgccggccgcaccgagcccggcgtctgctatcgcctg
tgggacgagccgcagacggcggcgctcccggccttcgccgcgcccgaaattctcgacgcc
gatctctccggccttgcccttgatctcgcggcctggggggtgagcgatccggggcgactc
aaatggctcgatccgccgccggcgcccgcctggaaggaggcggtcgcgcttgatcgcgaa
ctcggggcgctcgacgacgacggtcggcttaccgacatgggccgcgccatgcgggcgctg
ccgcttgcgcccagattggcgcgaatggtggtcgaggcggcgggtcagggcgaggcgaag
cgcgccgccgaactcgccatgctgctctcggagcgggggatcggcggcgccgacgccgac
ctttcgcatcggctcgagcgcctgcgcggcgagaagtcgaagcgcgcgggcgacgcgctg
cgcctcgcggcgcaatgggcgcggcaggcgatggcggcggcaggcgttttgccccctccc
caaccctcccccgctaacgcgggagagggagtggactcggcgcttcatcaagagagagcg
aatcgccgatcgttcgcgtcccctctcccgcgaagcgggggagggctggggagggggctg
ttatccgacggcgcgctgatcgcgctcgcttttcccgaccgcatcgccaaatcgcgcggc
gcgcgcggcgagttcctgatggcgaacggccgcgccgcgatgttgcagttcgaagatcct
ctgtcacgcgcgccattcctcgccgtcgccgaactcaccggccgggcggcgcaggcgcgc
atccttgcggcttgtgcgctcaccgccgaggaggttgagacgattgcgggcaatcgtatc
gagacgcgcgacgaaaccgtcttcgacgcggcgagcgcaagcttgcggcggcgcgccttc
cggcgtctgggggcgatacgactctccgagcgcaatctggcggtcgagccgtctgaccag
aatgcgcggatccttgcgcgcggcgtggccgcggttggcgtcgcgcggctgccgtggacg
aagacgcaaatgcagcggcgcgaccgggtcgcctttctgcgccgcgccgagggcgacgag
tggccggacctctccgacgccgctctggcggcaagcgccgaagagtggcttgcgccgttc
attgaggggcgcacgtcgctcgcggatattgcgaccgacgacctcgaggccgcgctcgct
cagcttctcccctatgagttgtcgcgcaggctcgatgcggaagcgccctcgcatttcgag
acgccggccggatcgcgccatgcgctcgactactccaccgagaacggaccgatcctcgcg
gtccgggtgcaggagctttacggcctttcgagtcacccgacgcttgcgcgcggacgcgcg
cccttaaccctcgaactgctttcgccggcgcatcggccgatacagacgacccgagatttg
ccgagcttttggaaaggctcctggagcgaggtgaagaaggagatgagagggcgctatccg
cgccatctctggccggatgatccggcggccgcgcagccgacgacgcgcgccaagccgcgg
ggctcgtga
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