Methylocystis rosea: EHO51_06375
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Entry
EHO51_06375 CDS
T05721
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mros
Methylocystis rosea
Brite
KEGG Orthology (KO) [BR:
mros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mros03016
]
EHO51_06375 (thpR)
Enzymes [BR:
mros01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EHO51_06375 (thpR)
Transfer RNA biogenesis [BR:
mros03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EHO51_06375 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AZG76385
UniProt:
A0A3G8M4X6
LinkDB
All DBs
Position
1319841..1320410
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AA seq
189 aa
AA seq
DB search
MPRLFTALEIPRSIAESLARLRGGIPGGRWIDVENYHVTLRFIGDVDDAFARDAANALSF
IRRPEVTVTFDQLTSFGGDKPRAIVARARLEPTLMDMQAEQERLLRRLGAPPEPRKFIPH
VTLARLRGASAGAVAAYLGARGYFPPLRFTAERFVLYSSRDSVGGGPYIVEAEYPLLVAP
QALTGTARG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcccagactgtttacggccctggagattccccgatcaatcgccgaaagcctcgcgcgc
ctgcgcggcggaatccccggcggccgctggatcgacgttgagaattatcacgtcaccttg
cgcttcatcggcgacgtcgatgacgctttcgcgcgcgacgcggcgaatgcgctctccttc
atccgccgtccggaagtcaccgtcaccttcgaccagctgacgtcgtttggcggcgacaag
cctcgcgccatcgtggcgcgcgcgcggctggagccgaccctcatggacatgcaggcggag
caggagcggctattgcgtcggctcggcgcgccgcccgagccgcgcaaattcatcccacat
gtgacgctcgcgcgtctgcgcggcgccagcgctggcgccgtcgccgcctatctcggcgcg
cgcggctatttcccgccgctgcggttcacggcggagcgcttcgtgctttattcgtcgcgc
gattccgtggggggcggcccctacatcgtcgaggcggaatatccgctgcttgtggcgccg
caagcgctgacaggaacggcgcgaggttag
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