Methylocystis rosea: EHO51_09085
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Entry
EHO51_09085 CDS
T05721
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mros
Methylocystis rosea
Pathway
mros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHO51_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mros03019
]
EHO51_09085
Enzymes [BR:
mros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHO51_09085
Messenger RNA biogenesis [BR:
mros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHO51_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CheB_methylest
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AZG76872
UniProt:
A0A3G8M6Q2
LinkDB
All DBs
Position
complement(1859379..1860728)
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AA seq
449 aa
AA seq
DB search
MKATTEVMTFSDLGLNEILLRALEREGYTTPTPVQSQAIPALLQGRDLLGVAQTGTGKTA
AFALPILHRLLADKRRPAPNTARALILAPTRELAAQIADSFRSYGHFFRPSVGVIVGGVS
HRPQNEMLARGLDVLVATPGRLLDHLGSGRLKLGTTEVLVLDEADHMLDLGFIVPIRQIV
AKLPKQRQTLLFSATMPREISALADDMLRDPTKVSVTPAATTAERVAQHVYLVSGGAKRD
LLVELLNDREISRAIVFTRTKRGADRVAQHLESAGVGADAIHGNKSQSQRLRALDGFRKG
RTRVLVATDIAARGIDVDGVTHVVNFELPEVAEAYVHRIGRTARAGATGQAISLCDNGER
PLLRAIEKLTRQTLEFTDRRAEGARQDDGDTARPASKRPNSPAAHRNGAQHPRREGQRPA
AKRPGASFNGQKRPANGGARHKQASRPQV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacaactgaagtgatgacattctccgatctcggcttgaacgagatcctgctc
cgcgcgcttgagcgcgaaggctacaccacgcccaccccggtccagtcgcaggctattcct
gcgcttctgcaaggtcgcgaccttctcggcgtggcccagaccggcaccggcaagacggcg
gctttcgctctgccgattctgcaccgtctgctggccgacaagcgccgcccggcgcccaac
acggcgcgcgcgctgattctcgcgccgacacgcgaactcgcggcgcagatcgccgacagt
ttccgttcttatggccatttctttcggccaagcgtcggcgtcatcgtcggcggcgtgtcg
catcgtccgcaaaatgaaatgctggcgcgcggcctcgacgttctggtggcgacgcctggg
cgtctgctcgaccatctcggcagcggccgtttgaagctcgggacgaccgaagtgctcgtt
ctcgacgaagccgaccatatgctcgatctcggattcatcgttccgatccgccagatcgtc
gcgaaattgccgaagcaacgccagacgctgctgttctcggcgacaatgccgcgggagatc
tccgcgctcgcggacgacatgctgcgcgatccgacgaaagtttcggtgacgccggcggcg
accaccgccgagcgtgtcgcgcaacatgtctatctggtctcgggcggcgcgaagcgcgac
ctgctcgtcgagctgttgaacgaccgcgagatttcgcgcgcgatcgtgtttacgcgcacc
aagcgcggcgccgatcgcgtcgcgcagcatctggagagcgccggcgtcggcgccgacgcg
atccacggcaacaagagccagagccagcggctgcgcgctcttgacggtttccgcaagggc
cgcacgcgggtgcttgtcgcgaccgacatcgccgcgcgcggcatcgacgtcgacggcgtg
acgcatgtcgtcaatttcgaattgccggaagtcgcggaagcctatgtgcatcgcatcggc
cgcaccgcgcgagcgggcgcgaccggccaggcgatttcgctctgcgacaatggcgagcgg
ccgctgctgcgcgcgatcgaaaagctgacgcgtcagacgcttgaattcactgaccggcgc
gccgaaggcgcccgccaggatgacggcgacaccgcgcgcccggcgtccaagaggccgaat
tcgccggcggcgcatcgaaacggcgcgcagcatccgcgtcgcgagggacagcgtcctgcg
gcaaagcgaccgggcgcctctttcaatggtcaaaagcgccccgcaaatggcggcgcgcgt
cataagcaagcgagccgtccgcaggtttaa
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