Methylocystis rosea: EHO51_14425
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Entry
EHO51_14425 CDS
T05721
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mros
Methylocystis rosea
Pathway
mros02020
Two-component system
mros02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mros00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EHO51_14425 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EHO51_14425 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mros03021
]
EHO51_14425 (rpoN)
Transcription machinery [BR:
mros03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHO51_14425 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_Crp_2
Phage_CII
HMA_PCA1
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AZG77828
UniProt:
A0A3G8MAH8
LinkDB
All DBs
Position
complement(2975642..2977207)
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AA seq
521 aa
AA seq
DB search
MAISTKLMMRQGQALVMTPQLLQAIKLLQFSNLELAAFLHDELERNPLLEAHEGDGGVDA
ADPSQGGEPSAAEPFEGPQEGDWAQQDLAVDSATLSADLGADMSNSFEPEGPSIGERARD
EAPDGAGLSATSWTGAAGGGPADGEAPNLEAYVADRQSLHEHLAEQLALACPDPRHRIIG
QSIIDAIDESGYLRESLDEIAARLEANMAEAEHILATIQTFDPSGVGARDLAECLAIQLK
ERDRYDPAMQAFVANLPLVARRDFAQLAKLCGVDDEDIADMAAELRRLEPKPGRAFGGAP
IQPLVADVIVRAAADGAWHVELNADALPRVLVNHSYAAQVSAVATGPADKSFISSCLQNA
NWLTKSLEQRARTILRVASEIVRLQDAFLTHGVEHLRPLNLRTVADAIGMHESTVSRVTS
NKYMMTPRGVFELKYFFSASIATTSGAAAHSAEAVRFRIKQMIDRETPDGILSDDAIVER
LKASDIEIARRTVAKYRDSLRIPSSVDRRRAKLAQARMTTH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttccaccaagttgatgatgcgtcagggccaagccctggtgatgacgccgcag
ctgctccaggcgatcaagctgctgcagttttccaatttggagcttgccgcctttttgcat
gatgagctcgagcgcaatccgctgctcgaagcgcatgaaggcgatggcggcgtcgatgcg
gccgatccttcccagggtggggagccgagcgcggcggagccctttgaagggccgcaggag
ggcgactgggcgcagcaggatctcgccgtcgactccgcgacgctctccgccgatctcggc
gccgacatgagcaactcttttgagcccgagggtccgtcgatcggggagcgggcgcgggat
gaggcccctgacggcgccggtctgtcggcgacctcctggaccggggccgctggcggtggg
ccggctgacggggaagcgcccaatctcgaagcttatgtcgccgatcggcagagcctccac
gagcatctcgccgaacagctggcgctcgcctgccccgatccgcgtcacagaatcatcggc
caatcgatcatcgatgcgatcgatgagagcggttatctgcgagagagcctggacgagatc
gccgctcgtctcgaggcgaacatggccgaggccgagcacattctggcgacgatccagacc
ttcgacccctcaggcgtcggcgcgcgcgatctcgcggagtgtcttgcgatccagctcaag
gagcgcgaccgctatgatccggcgatgcaagcgttcgtcgccaatctcccgctcgtcgcg
cgccgcgattttgcgcagctcgccaagctgtgcggcgtcgacgacgaagacatcgccgac
atggcggcggagctgcgccggttggagcccaagccaggccgagcgttcggcggcgccccg
attcagccgctcgtcgccgacgtcattgtgcgcgccgccgcggacggcgcctggcatgtg
gagctcaacgccgacgcgctgccgcgcgtattggtcaatcacagttatgcggcgcaagtc
agcgccgtcgccaccggccccgccgacaaaagcttcatttcgagctgcctgcagaacgcc
aactggctgaccaagagtctcgagcagagggcccgcaccattctacgcgtcgcttctgaa
atcgtgcgattgcaggacgcctttctcacgcatggcgtcgaacatctgcgtccgctgaat
ctgcgcacggtcgccgatgcgatcggcatgcatgagtcgacggtctcgcgagtgacgtcg
aacaaatacatgatgacgccgcgcggcgtcttcgagctcaaatatttcttctccgcgtcg
atcgccacgacgagcggcgccgccgcgcattcggccgaggcggtgcgttttcgcatcaag
cagatgattgatcgggaaacgcccgacggcatcctgtcggacgacgcaatcgtcgaaagg
ctgaaggcgagcgacatcgaaatcgcccggcgcacggtcgcgaaataccgcgacagtttg
cgcattccatcctcggtcgatcgccgccgcgccaagcttgcacaggcgcgcatgacaacc
cattaa
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