Methylomonas rapida: NM686_001540
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Entry
NM686_001540 CDS
T08781
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mrp
Methylomonas rapida
Pathway
mrp00470
D-Amino acid metabolism
mrp00550
Peptidoglycan biosynthesis
mrp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NM686_001540 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NM686_001540 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mrp01011
]
NM686_001540 (murD)
Enzymes [BR:
mrp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NM686_001540 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mrp01011
]
Precursor biosynthesis
Amino acid ligase
NM686_001540 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
OB_RNB
2-Hacid_dh_C
XdhC_C
NAD_binding_8
Pyr_redox_2
FAD_binding_3
Bravo_FIGEY
Motif
Other DBs
NCBI-ProteinID:
WAR45221
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All DBs
Position
complement(336879..338246)
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AA seq
455 aa
AA seq
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MDTTPTLLSNLQAHFKLDPAETRLLIVGLGATGYSAAQFLQQTPIKFAVIDSRRNPPQID
SLREQMPDVPVFSGGFDQSAFEVATHLLVSPGVSLNEKAIHKAMQAGVTILSDIDLFACA
TDKPILAVTGSNGKSTVTTMLGDMGNAAGFKTAIGGNLGTPALDLLQQDADLYVLELSSF
QLERTTALNAKAATVLNLSADHLDRHDSMTDYAQEKQRVFRGDGAMILNVDDPLVMAMKD
PARTWFGFSIERQADFYLRRGEIDQLMHGDHVLMNADELNLEGSHNIANALAALALGHAF
GLDVNAMCRALKKFKGLPHRMQKVADIHGVRWVNDSKATNIGASIAALQGYRRKVILIAG
GDGKGADMTELTPIVKEKTKAVVLMGKDAALIDQALKGCVPTHFAGTMKEAVKIAAKLAQ
AGDSVLLSPACASLDQYKSYADRGNQFAQAVLELS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggataccacccccaccttgctcagcaatctgcaagctcatttcaagctggaccctgcc
gaaacgcgtctattgatcgtcggcctgggggcaaccggttattcggccgcgcaattcttg
cagcaaacgccgatcaagttcgccgtgatcgacagccgtcgcaatccgccgcaaatcgat
agcctgcgcgagcaaatgcccgacgtaccggttttttccggcggtttcgatcaatcggct
tttgaggtggccacgcatttgttggtcagccccggcgtttccctgaacgaaaaagccata
cacaaagccatgcaggccggcgttacgatcctgagcgacatcgatctcttcgcttgcgcc
accgacaagcccatcctcgcggttacgggttcaaacggcaagagcactgtcacgacgatg
ctgggcgacatgggcaacgccgcgggtttcaaaaccgcgatcggtggcaaccttggcacg
cctgccctggatttgctgcagcaagacgccgatctttatgtgctggaactgtcgagcttt
caactggaacgcaccaccgcgctgaacgccaaagccgcgaccgtattgaatttgagcgca
gatcacctcgaccgccacgacagcatgacggattatgcccaggaaaaacaacgcgtcttc
cgcggtgacggcgcgatgatactgaatgtcgacgacccattggtcatggccatgaaagat
cccgccagaacctggtttggattttcgatcgaacggcaagccgatttttatttgagacgc
ggcgaaatcgatcagttgatgcacggtgaccacgtcttgatgaatgccgacgaactgaat
ctggaaggcagccataacatcgccaacgcactggcggcactggcgcttggccatgctttc
ggcctggatgtcaacgccatgtgccgggcgttgaaaaaattcaagggcttgccgcatcgc
atgcagaaagtcgccgacattcacggcgtgcgctgggtcaacgactccaaggccaccaac
ataggcgcctctattgccgcgttgcaaggctatcggcgcaaggtcatcctgattgccggc
ggcgacggcaaaggcgcggacatgaccgaattgacgcctatcgtgaaagaaaaaaccaaa
gccgtcgtgttgatgggcaaggatgcggccttgatcgatcaagcgctaaagggatgcgtt
ccgacccatttcgccggcactatgaaagaagcggtcaagatcgcggccaaactggcgcaa
gccggggacagcgtgttgctgtctccggcttgcgccagtttggaccaatataagagttac
gccgaccgcggcaaccaattcgcgcaagccgtgctggagttaagctga
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