Methylomonas rapida: NM686_001920
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Entry
NM686_001920 CDS
T08781
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
mrp
Methylomonas rapida
Pathway
mrp02020
Two-component system
mrp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NM686_001920
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NM686_001920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrp03021
]
NM686_001920
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mrp02035
]
NM686_001920
Transcription machinery [BR:
mrp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NM686_001920
Bacterial motility proteins [BR:
mrp02035
]
Flagellar system
Flagellar assembly proteins
Stator
NM686_001920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_28
HTH_38
UPF0122
TY-Chap3
DUF1548
Motif
Other DBs
NCBI-ProteinID:
WAR46990
UniProt:
A0ABY7GR36
LinkDB
All DBs
Position
417673..418404
Genome browser
AA seq
243 aa
AA seq
DB search
MYAAMQAGNTDDMVSQHAPLVKRIAYHLMGRLPDTVQIEDLIQAGMLGLLEAIKHYDAGQ
GASFETYAGIRIRGAMLDELRRADWTPRSVHKKARMVAEAIREVENQVGRDVKDSEVASH
MGISLEEYRQILQDTLSCKTFSVEELVQGESGVIDDIHDETQPEEQLIQQHFQRALARAV
SELPERERLVVSLYYDEELNLREIGQVLGVSESRVSQICSQAMLRLRARLADWLERKDND
ARR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgcgatgcaggccggcaacaccgacgacatggtgtcccagcacgcgccgcta
gtcaagcgcattgcctatcatttgatggggcgtttgcccgataccgtgcaaatcgaggat
ttgattcaagccggcatgctggggttgcttgaagccatcaaacactatgatgccggtcaa
ggagccagcttcgaaacctatgccggcattcgtatccgtggggcgatgttggatgaattg
cgccgcgccgattggacgccgcgttccgtgcataaaaaagcccgcatggttgccgaagcg
attcgagaggtcgaaaatcaagtaggccgcgatgtcaaggatagcgaagtggccagtcac
atggggatcagtctggaagagtatcggcagatactgcaggataccctgtcctgtaaaacc
tttagcgtcgaggaattggtccagggcgaaagcggcgtcatcgacgacatccacgacgaa
acgcagcctgaagagcaattgatacaacagcattttcagcgggccttggccagggcggtt
tccgaactgccggagcgggagcgcttggtggtgtctctttactatgacgaagaattgaat
ttgcgcgaaattgggcaagtcttgggcgtcagtgaatcgagggtcagtcagatttgcagc
caggccatgctgcggctccgggccaggcttgcggattggctggaacggaaagataatgac
gcaagacgctga
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