KEGG   Methylomonas rapida: NM686_002090
Entry
NM686_002090      CDS       T08781                                 
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
  KO
K03806  N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
Organism
mrp  Methylomonas rapida
Brite
KEGG Orthology (KO) [BR:mrp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mrp01011]
    NM686_002090 (ampD)
Enzymes [BR:mrp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.28  N-acetylmuramoyl-L-alanine amidase
     NM686_002090 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:mrp01011]
 Peptidoglycan biosynthesis and degradation
  Amidase
   NM686_002090 (ampD)
SSDB
Motif
Pfam: Amidase_2
Other DBs
NCBI-ProteinID: WAR45325
LinkDB
Position
449121..449663
AA seq 180 aa
MQIHNHRIDCARQLNSPNCDERPDPEDITLLVIHCISLPPEQFDGDYIDQLFCNGLNPDE
HPYFAEIHGLKVSAHVLIRRDGSLVQYVPFDRRAWHAGVSWHQGRERCNDFSIGIELEGS
VNQVYSDRQYAQLAELVRALLANYPALSRERIVGHSDIAPGRKSDPGPFFDWQRLNDLLV
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaatccataatcatcgaatcgattgcgccagacagctaaattccccgaattgcgat
gaacgtcccgatccagaggacatcacgttgctggtgattcattgcatcagcttgccgccg
gagcaatttgacggtgattatatcgatcaattgttttgtaacggactcaacccggatgaa
catccttattttgccgaaattcacgggctcaaagtgtcggcccatgtcttgatccggcgg
gatggttcgctggtgcaatatgtgccgttcgataggcgcgcctggcatgccggggtttct
tggcatcaggggcgcgagcgatgcaatgatttttcgatcggcatcgaactggaaggttcg
gtcaatcaggtctatagcgacaggcaatatgctcaactggccgagttggtgcgcgcattg
ttggcgaactacccagccttgagccgggagcgaattgttgggcacagtgacatagcgcct
ggccggaagtccgatcccggccccttttttgactggcaaaggctgaatgatttattggtc
tag

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