Methylomonas rapida: NM686_002275
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Entry
NM686_002275 CDS
T08781
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mrp
Methylomonas rapida
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrp03032
]
NM686_002275
03036 Chromosome and associated proteins [BR:
mrp03036
]
NM686_002275
03400 DNA repair and recombination proteins [BR:
mrp03400
]
NM686_002275
DNA replication proteins [BR:
mrp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NM686_002275
Chromosome and associated proteins [BR:
mrp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NM686_002275
DNA repair and recombination proteins [BR:
mrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NM686_002275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Lmo2446-like_N
Phage_holin_2_4
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WAR45359
LinkDB
All DBs
Position
495228..495500
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAAASHLTKADAGRALDGFIKSVEEALKKGDSVALVGFGTFEVKERAERKG
RNPQTGEEITIKAAKIPSFKAGKSLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggaactgatcgatgctattgctgcagcatctcatttgacaaaagccgat
gccggccgtgctttagatggttttatcaagtctgttgaagaagcgctgaaaaaaggcgat
tcagtagccttggttggttttggcaccttcgaagttaaagaaagagcggagcgcaaaggt
cgtaatccgcaaaccggcgaagaaatcactatcaaggccgcaaaaattccttcatttaaa
gctggcaaatctttaaaagatgcggtaaactag
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