Methylomonas rapida: NM686_003380
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Entry
NM686_003380 CDS
T08781
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mrp
Methylomonas rapida
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrp03021
]
NM686_003380 (rapA)
Transcription machinery [BR:
mrp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NM686_003380 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
PTX3_N
Motif
Other DBs
NCBI-ProteinID:
WAR45571
UniProt:
A0ABY7GM28
LinkDB
All DBs
Position
708471..711239
Genome browser
AA seq
922 aa
AA seq
DB search
MNDFIPGQRWISNTESELGLGMILETEFNRVTVLFLATGDKRVYARDNAPLTRVKFIEGD
VIESTDYVKITVQQVQQHNGLLSYIGLDEDGQLQQIDEMELNHHIQFNKPQDRLFTGQFD
PSAWFSLRFETWRRQQQHQQSAAKGLLGARAALIPHQIYIAHQAANRVAPRIMLADEVGL
GKTIEAGLILHHRLINGLSQRVLILVPEALMYQWLVEMLRRFNLRFSLLDETRCLACPDE
NPFAAEQLVLCSQQFFADFPERQAQALDAGWDMVVVDEAHHLEWSEQSPSSDYLFVEQLA
NSVDGLILLTATPEQLGKESHFARLRLLDPDRFYNFHQFIQEESQFAPVAELANQLISAQ
PLSREQQSRLKTLLQHDNVDKLLQQFNDEPDNQDVCEELIKLLLDHHGTGRILFRNSRHT
VQGFPDRQRHGYPLTGEATAELASSPYFSWLVAKLKELGDEKALLICQRAETVIQLEQLL
RQHVGHTAAVFHEGMSIVERDRAAAFFADDESRAQVLLCSEIGSEGRNFQFVRHLILFDL
PRNPDLLQQRIGRLDRIGQKHVIQIHIPYLIDSPRHLLFRWYDEGLDAFRHNCSAAGQVA
KQLDAELTELLAGSNQASHEAFIDKTRRLTAQIEAELHNGRDQLLELNSCRPVEASVLID
QLHRIERDDSFWPYMEAMFDCYGVDVEYHSKDCHILWPSENLRIAHFPMLQDDGLTVTVS
RDVALAREDMQFLTQEHPMVLAAMDLVLSSETGNAAVSIIKQPQLKAGQFLLELLFVVEC
SAPAHLQIGRFLPHTPLRVLIDQNKKDLTAAIAHDSMLETGDNVDKAQITQFLSAQRQHV
QEMIQVGEQKATLMMQKLITESSNQMIAVFTGEIKRMVRLKTINPSIKDQEIQQLKEMTM
LAHESIQEAQLRLDAVRFVITS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactttatccccggccagcgctggattagcaataccgagtcggaactcggttta
ggcatgattttggaaacggaattcaatcgcgtgacggtgctttttctcgcaactggcgac
aagcgcgtctatgcgcgcgacaacgcgccgttgacgcgggtgaaattcatcgaaggtgat
gtcatcgagtccaccgattacgtgaagatcaccgtgcagcaagtgcaacagcacaatgga
ttattgagctatatcggcttggatgaagacgggcaattgcagcaaatcgatgaaatggaa
ctcaatcatcatattcaattcaacaagcctcaggatagattgtttactggacagttcgat
cccagcgcctggtttagtctccgctttgaaacctggcggcgccagcagcagcatcaacaa
tcggcggccaaaggtttgctgggtgcaagggcggcattgattccgcatcagatttacatc
gctcatcaggccgccaatagggtggcgccgcgtatcatgctggccgacgaagtcggtttg
ggcaaaaccatagaagccggcttgattctgcatcaccgtttgatcaatggcttgagccag
cgcgtgctgattttggtgccagaagccttgatgtatcaatggttggtggaaatgctgcgg
cgctttaatctgcgtttcagcttgctcgacgaaacccgttgtctggcctgccccgatgaa
aacccgtttgcggccgaacaattggtgttgtgcagccaacagttttttgccgattttccc
gagcgtcaggcgcaagccttggatgctggctgggacatggtggtagtggatgaggcgcac
catctggaatggagcgaacaatcgccgagctccgattatttgtttgtcgagcaattggca
aacagcgtggatggtttgattttgttgacggcgaccccggagcaattgggcaaggaaagt
catttcgcccgcttgcgcctgctcgatcctgatcgtttttataattttcaccaattcatt
caggaggaaagccaatttgccccggttgccgaattggccaatcagctgatctcggcccag
cccttgagcagggagcagcaaagccgacttaaaacgttgctacagcacgacaacgtcgac
aagttgttacagcagttcaatgatgagcctgacaatcaggatgtgtgcgaggagctgatc
aagctgttattggatcatcacggcaccgggcggattttgttccgaaattcccgtcatacc
gtgcaaggctttccagatcgccagcgccatggttatcctttgacaggcgaggcgacggcc
gagttggcgagcagtccttacttttcgtggttggtcgccaagctgaaagaactgggtgac
gaaaaagccctgctgatttgccagagggctgaaaccgtgattcagctggaacaattgttg
cgccaacatgtcgggcataccgcggcggtatttcatgaaggcatgagcatcgtcgagcgc
gaccgggccgcggcgttttttgccgatgacgaaagcagggcgcaagtcctgttatgttcg
gaaatcggtagcgagggacgtaattttcagttcgtgcgtcacttgattttgttcgatttg
ccgcgtaaccccgatttgttgcagcagcgtatcggccggctagatcgtatcgggcaaaaa
cacgtgattcagattcacattccttatttgatcgatagtccacggcatttattgtttcgt
tggtatgacgaggggctggacgccttccggcataattgttccgctgcgggacaggtcgcc
aaacaactggatgcagaattgacggaattactggcgggttctaatcaagcgagtcacgaa
gcattcatcgacaagactcgtaggctgaccgcgcaaatcgaagcggagctccacaacggc
cgcgatcagctactggagctgaattcctgccggccggtcgaggcgtcggtattgatcgat
caactccatcggatcgagcgcgatgacagcttttggccttatatggaggcaatgttcgat
tgttatggtgtcgatgtcgaataccattcgaaggattgtcatatcctgtggccgagcgaa
aacttgcgcatcgcgcattttccgatgctccaggacgatggcttgacggtcaccgtaagt
cgggatgtggcattggctcgggaggatatgcaattcctgacccaggagcatcccatggtg
ttggcggcgatggatttggtgttgtccagtgaaaccggcaacgcggcggttagcatcatc
aagcagccgcagctgaaagcggggcaattcttgctggaattgctgttcgtcgtcgaatgc
agcgcgccggcacatctgcaaatcgggcgtttcttgccgcatacgccgctgcgagtattg
atcgatcagaacaaaaaagatttgacggcggcgattgcgcacgattccatgctcgaaact
ggcgacaatgtcgataaggctcaaatcacgcagtttttgagcgcccagcgtcaacatgtt
caggaaatgatccaggtcggagagcaaaaggccacgctaatgatgcaaaaactgatcacc
gaaagcagcaaccagatgattgcggtatttaccggtgagataaagcgcatggtcagattg
aaaacaatcaatcccagcatcaaggatcaggaaattcagcaattaaaggaaatgaccatg
ctggcacatgagagcatccaggaagcgcaattgaggctggatgctgtgcggttcgtcata
accagttaa
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