KEGG   Methylomonas rapida: NM686_004130
Entry
NM686_004130      CDS       T08781                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
mrp  Methylomonas rapida
Pathway
mrp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mrp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NM686_004130 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mrp02044]
    NM686_004130 (tssM)
Secretion system [BR:mrp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NM686_004130 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical APC1_C
Other DBs
NCBI-ProteinID: WAR45710
LinkDB
Position
857384..860929
AA seq 1181 aa
MGKLKAFFTNIWVIQFLGLLAFSILIWLAGPLIAIAGHVPLEAELPRILLIAGLFVVWVI
YRLLMQIRASSTEKQLVQQLVASDVDQVALASADEVDMLRKGFEEALTLLKQSRAEAKKG
GQFIYQLPWYVIIGAPGSGKTTALVNSGLHFPLAEKLGKHAIKGVSGTRNCDWWFADDAV
FLDTAGRYTTQESHQAVDAAGWAGFLNLIKKHRPLRPLNGVIIATSVSDLLQQSERERAE
HAKAVRTRIMELYQQLGVRLPVYQLFTKTDLVAGFSDFFADLAPEQRAQVWGETFSATTL
QGDHDVLAQFASGFSELLQRLQVRTLKRIQDERDIQRRAAIVDFPQQIALLKPAMMDFLQ
ATFMPNRYEEPVLLRGIYFTSGTQEGTPIDRVLGILAGAFHLDRQTVPMYSGQGKSFFLT
RLLKDVLFPEAELAGQDPVLAKRTRLLQLAAYVGAGLFFVLMMGLWTVSYFKNQTALDKV
QEQIAQYHAIKISGNDTQGNFNALLPRLNSLLAIRDIYQDSGFLSGWGLSQGDKIQAAAN
HSYEQLLRDYFLPAVLTRLKERMQGQEGNKQEVLYQLLKVYLMFNQTDKMDRSMAVAWIR
ADWDRQYATDPQALGQLVTHLNHLLDMQLQPVQVDDNFVAAVRSKLMQVPLIGQIYSRFK
TEALLDQSHDLRLSKALGPDAGRVFVMSDGKDVLSYTIPGLFTAYGYTELFLKKSRDFVK
DAVEQNWVLGSQAKLETLQIEQLHRELKKLYLNEYQAAWTDLLAKIKLQSALSTNQTTQI
LDILSRPDGPLHALLVTIDDNTALTRLNQRVSDALSQAAGKAVEAAGDKGGQLLEMAKEA
AGLGGEPDPVLAVENRFEALRNLVAGGPDKPSALEPVLQQLKSLRDYFLQLSVANTGGQA
LQNQANVFSGAGMDVLKQAQMEFARLPEPLKSWFQIVVSSGGQKLSSAAKGQLSDMVKTG
VASPCKAALGGRYPFSKSSAQDVLLADFAKLFAPAGVMDQFFQANLKPFVDTSKPVWTEM
ASEKPLGLSQASIRQFQTAARIRDAFFAVGNIPQVQFELKPQLLDNTVGTFRLQVEGQEA
VYRHGPEQAVSMKWPGPNPSQGVRIVFETLDGRQVSRGKEGTWAFFRLLDEATIIPGSAP
EKFTLTFQLQGFSASYELRAASVNNPFNLLELQSFRCPDAL
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgggtaagctcaaagcattttttaccaatatctgggtcatccagtttctaggcttgctg
gctttcagcattctaatttggctagcagggcctctgattgcgattgctgggcatgtaccc
ttggaagcggagttgcccaggattttgctaatcgcgggtttgtttgtggtgtgggtgatt
tatcgcttgctgatgcaaattcgcgccagcagcaccgaaaagcaactggtgcagcaattg
gtggcctcggatgtcgatcaggtcgcgctggcctcggccgatgaagtggatatgctgcgc
aagggctttgaagaagcattgacgctactcaagcaatcgcgggcggaagccaaaaaaggc
ggacagtttatttatcaattgccctggtacgtgatcatcggtgcgccggggtctggcaaa
accacggctctggtcaattccggcttgcattttcccttggcggaaaagttgggcaagcat
gccatcaaaggcgtcagcgggacgcgtaattgtgattggtggtttgccgatgatgcggtg
tttttggataccgccggccgctacacgacgcaagagagtcatcaggcggtcgatgcggcc
ggttgggccggatttttgaacctgatcaaaaagcaccggcctttaaggcctttgaacggc
gttatcatcgccaccagcgtgtccgacttattgcaacagtccgaacgggagcgggctgag
cacgccaaggcggtgcgtacccgcattatggagttgtatcaacaattgggcgtgcgcttg
ccagtttatcaactgtttaccaaaaccgatctggtcgccggctttagcgatttctttgcc
gatctggcgccggagcagcgggcgcaggtctggggggaaactttttccgccaccaccttg
cagggcgatcacgatgtattggcgcagtttgcgagtggtttttccgagttattgcaacgt
ttgcaagtgcgaaccttgaaacgtatccaggacgagcgcgatattcaacgccgcgcggcg
attgtggacttcccgcagcaaatagccttgttgaaaccggcaatgatggatttcttgcag
gccacttttatgcctaaccgttatgaagagccggtgttgttgcggggaatttactttacc
agcggcacgcaggaaggcacgcccatcgatcgggtgttgggcattctggcgggagccttt
catctggacaggcaaaccgtgccgatgtatagcggtcagggcaagagctttttcctgacc
cgtctgctgaaggacgtcttgtttccggaagccgaactagccgggcaggacccggtattg
gccaaacgcacccgcttgttgcaactggcggcttatgtcggcgctggcttgtttttcgtg
ctgatgatggggctgtggaccgtcagttatttcaaaaaccagaccgccttggataaagtc
caggaacagatcgcgcaatatcatgcgatcaaaatcagcggcaacgatacacaaggcaat
ttcaatgccttgctgccgcgcttgaatagccttttggcgattcgcgatatttatcaagac
agcggttttctgtccggttgggggttgtcacaaggcgacaaaattcaagctgccgccaat
catagctatgaacagctgctccgcgactattttctgccggcagtcctgacgcgcctgaag
gagcgcatgcaggggcaggaaggcaacaagcaggaggtactgtatcaattgctgaaagtg
tatttgatgttcaatcagaccgataaaatggatcgatccatggccgtagcctggatacgc
gccgattgggacaggcaatacgcgaccgatccgcaggccttggggcaactggtcacgcat
ttgaaccacctattggatatgcagttgcagccggttcaagtcgatgacaattttgtcgcc
gcagtgcgcagtaaattgatgcaagtgccgttgattgggcaaatttattcccgcttcaaa
accgaagccttgctggatcaaagccatgatttacgcctgagtaaggccttggggccggat
gccggccgagtgtttgtaatgtccgacggcaaggatgttttaagctataccattccagga
ctgttcacggcctatggttataccgagctgttcttgaagaaaagccgtgattttgtcaaa
gacgcggtcgagcagaactgggtcttgggtagtcaggccaagctggaaaccctgcaaatc
gagcagcttcatcgtgaactgaaaaaactgtatttgaacgaataccaggcggcctggacg
gatttactggctaaaatcaaattgcaatcggccttatcgaccaatcagaccacgcagatt
ctggatatattgtcgcgcccggacgggcccttgcatgccttgctggtaaccatcgatgac
aataccgcattgacccgcttgaaccaacgagtcagtgacgcgttgtcccaggcggccggc
aaagcggtggaagccgctggtgacaaaggcgggcagttgttggagatggccaaggaagct
gcaggtcttggcggtgagcctgatccggtgttggcggtggaaaatcggtttgaagccttg
cgcaatctagtcgctggcggccccgacaaacccagtgcattggaacccgtgttgcagcaa
ttaaaaagtctgcgggattatttcttgcaattgagcgtcgccaacactggcggacaggcc
ttgcaaaaccaggccaatgttttcagtggcgccggcatggatgtgttgaaacaggcgcag
atggagtttgcccgcctgcccgagcctttgaagagctggtttcaaatcgtcgtcagcagc
ggcgggcaaaagctgtcttccgccgcgaaggggcaattgagcgacatggtcaaaaccggc
gtggcctcgccttgcaaggcggcgttgggcggacgctatccgtttagcaaaagctcggcg
caagacgtgttgctggcggactttgccaaactgttcgcgccggcgggtgtgatggatcag
ttttttcaagccaatttgaaacccttcgtcgataccagcaagcccgtatggacggaaatg
gcttcggaaaagccgctgggcctgtcgcaagcctcgattcggcaatttcagacggcggcc
aggattcgcgatgcctttttcgccgtgggcaatatcccgcaggtgcaattcgagttgaag
ccgcaattgctggataacaccgtcggcacgtttcgcttgcaggtcgaaggccaggaggcc
gtttaccggcatgggccggaacaagccgtcagtatgaaatggcccgggcccaatcccagc
caaggcgtgcgcatcgttttcgagaccctggatggccggcaagtcagccgcggcaaggaa
ggcacctgggcgtttttcaggctgctggacgaagccaccatcatacccggcagcgcgccg
gaaaaattcacgctgacttttcagttacaaggcttcagcgccagttatgagttgcgggcg
gccagcgtcaacaatccctttaatctgctggaactgcaaagtttccgttgcccggacgcg
ctgtga

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