Methylomonas rapida: NM686_007575
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Entry
NM686_007575 CDS
T08781
Name
(GenBank) PAS domain S-box protein
Organism
mrp
Methylomonas rapida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_9
HATPase_c
PAS
HisKA
PAS_4
PAS_3
DUF4118
PAS_8
Hpt
GAF_2
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
WAR46366
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All DBs
Position
1594454..1598587
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AA seq
1377 aa
AA seq
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MIGKGLGYKIGAYALALLLPLLMLYCRDHFLVAFGERPLLILFMLPIVCLAVLTGKGPGL
TATLTTALLTAYFLIPPIGSFAFGAPHDLFQWSVLIANGFLVSYASEMLHRARFDEAERR
RQLEAALNIQRQDQALLLRGKERQRHLAGIVEQVAAVRDMDGLMDVAKRSMRQLIDADGV
TVVLRKDGQCCYVDEDAIAPLWKGQCFLLEHCVSGWVMLHAEPAVIEDVYADPRVLQAAY
RPTFVKSLSMVPIGRGEPVGAIGSYWAVPHRASDEELELQQAVADAVAVGLDNLRLYRDM
ALARQAAEQAAEEVRKQATAREEEQNAALDAQIRSRRAALNLMEDAVSARQQLELANAAL
RESETRFKEIFNGVSDAIFIQELETGRVLEVNYGMCKMYGYRCEDVTSLYVDDLSAGVPP
YTWADIQPMIQKAREQGPQTFEWQARARDGRLFWVEVSLKVAEIDSHLRLLVVVRDITER
KTAEAELMKLSLAIQQSQESIVITDLQGRIEYVNDTFVRATGYSREEAIGQNPRILKSGK
TPSARYDELWEALAQGRTWRGEFVNQRKDGSEYVEFASLSPVRRPDGTVTHYLAIKEDIT
EKKRLARELDEHRHHLEELVEQRTRELQLAKAAAEAANIAKSTFLANMSHEIRTPLNAIV
GFAHLLQRSPLDADQRDKLRKLTDGAHHLLAVINDILDLSKIEAGKLAIESIDFEMEQVL
ENACALIATKAQSKGIELVIDIEPALVGVFRGDPTHLGQALLNYASNAVKFTEHGAIIVR
ARLLEESDDELLVRFEVQDSGIGIDPEKLGKLFQYFEQADASTTRKYGGTGLGLAITKRQ
AELMGGEVGVDSVLGQGSTFWFTARLGKSKTDGKQCLAGSLSNRCVLLVDTASSARDVLK
QMLHTLGVRCRIADSVESALADIVTSDSDGAPFDCILLDWQVMGQDMKGLSRRISGLPLR
QRPPYLLALIQDDVELRQKVRRAGFTAELTKPVTLSGLHDTLVDVLRGHKLPAASRETGT
SSAEQALTQNCRGCRVLLAEDNPINQTVALTLLTDAGLSVDVADDGKKALEMCEHGHYDL
ILMDMQMPVMDGLDATRAIRQLPGGQQIPILAMTANAFGEDRARCMQAGMNDFLAKPVDP
DALFAMLLKWLPAQTTLVDTLEPDRSAESAPQAPAVDLSRVPGLDLQQGLKCTRGDIGSY
LSLLGRFVREHGNDVAGACERYAAADYEEARRLAHTLKSVSATLGAGSVRAAAAELEQAI
LARREQADMERLAQKLEDEYRRLAAAVLDLESLSAEAEVVPGELDWPKLDAILDQLDALL
EQGNVRSNEVFQEHAALLHAALGKLGQELERAIDNFDYPIALARLREARPGLPRSRS
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtaaaggattgggatacaaaataggcgcttatgcactcgctttgctgttgccg
ctattgatgctgtattgccgggatcacttcctggtcgccttcggtgagcggccgttgttg
attttgttcatgctgcctatcgtttgcctcgcggtattgaccggcaagggaccgggcctg
acggcgacgctgaccaccgccttattgaccgcttattttttgattccgcccatcggcagt
tttgcgttcggagccccgcacgatctgttccaatggagcgtcttgattgcgaacgggttt
ttggtcagttatgccagcgagatgttgcaccgcgcccgtttcgacgaagccgaacgcagg
cggcaactggaagcggcgctgaacatacagcggcaggatcaggctttattgttgcgcggc
aaggaacgccagcgccatttggccggcatcgtcgaacaagttgccgcggtgcgcgacatg
gacggcttgatggacgtcgccaagcggtcgatgcgccaattgatcgacgcggacggcgtc
acggtggttctgcgcaaggacggtcaatgttgctatgtcgacgaagatgccatcgctcct
ttgtggaaggggcaatgctttctgctggagcactgtgtttccggatgggtcatgttgcat
gccgagccggcggtgatcgaggatgtttacgcggacccgcgcgtgctgcaggccgcatat
cgtcccactttcgtaaaaagtctgagcatggtgccgattggccgtggcgaacccgtcggc
gcgataggcagttattgggctgtgccccatcgggccagcgatgaggaattggaactgcag
caggctgtagccgacgcggtggccgtcggcttggataatctgcggctgtaccgggacatg
gcgctggcccggcaagccgctgaacaggcggcggaagaagtcaggaaacaagccacggcg
cgggaagaagagcagaacgcggcgctggatgcgcaaatccgatcgcgccgggccgcgttg
aatctgatggaagacgccgtcagcgcacgtcaacagctcgagctggccaacgcggcgctg
cgggaaagcgaaacccgcttcaaagaaatcttcaacggtgtcagcgatgccattttcatc
caagagttggaaaccggccgggttctggaagtcaattacggcatgtgcaagatgtatggc
tatcgctgcgaagacgtcacaagcttgtatgtggacgacctcagcgctggcgtgccgcct
tatacctgggctgatatccaacccatgattcaaaaagcgcgcgagcaagggccgcagact
ttcgagtggcaggcccgcgcccgtgacggccgtttgttttgggttgaagtcagcttgaaa
gtcgccgaaatcgacagccatctgcgcctgctggtggtcgtgcgcgacatcaccgaacgg
aagacggccgaggcggaactcatgaaattatcgctggcgattcaacaaagccaggaaagc
atcgtcatcaccgaccttcaaggccgcatcgagtatgtcaacgataccttcgttcgggct
acgggttatagccgcgaggaggccataggccagaatccgcgcatcctgaaatccggcaag
accccgtccgcccgttacgacgaactgtgggaagcgttggcccaaggccggacttggcgc
ggcgaattcgtcaatcaacgcaaggacggcagcgaatacgtcgagtttgccagtttgagt
ccggtgcggcggcccgatggcacggttacgcattatttggcgatcaaggaagacatcacc
gaaaagaaacgcttggcgcgcgaactggacgagcatcgccaccacctggaggaattggtc
gaacagcgcacgcgggaattacagctcgccaaggcggcggcggaggccgccaacattgcc
aaaagcacgtttttggccaacatgagccacgaaatccgcacgccgctgaacgccatcgtc
ggtttcgcccacttattgcagcgcagccccctcgacgccgaccagcgcgacaagctgcgc
aagttgacggacggcgcccaccatcttttggccgtcatcaacgacatactcgatctatcc
aaaatcgaagccggcaaattggccatcgaatcgatcgatttcgagatggaacaagtgctg
gaaaacgcctgcgcgctgattgcgaccaaggctcagtccaagggaatagagctggtcatc
gacatcgagcctgctttggtcggcgtgtttcgcggcgatccgacccatctggggcaagcc
ttgctgaattacgccagcaatgcggtcaagtttaccgaacacggcgccatcatcgtccgc
gcccgcctgctggaagaaagcgacgacgagttgctggtgcgtttcgaggttcaagacagc
ggcataggcatagacccggaaaagctgggcaaattgtttcaatatttcgaacaggcggat
gcttccacgacacgcaaatacggcggcaccgggctcggcctggccattaccaagcgccag
gccgagttgatgggaggggaagtcggtgtcgacagtgtattggggcaaggaagcaccttt
tggtttaccgcgcggctcgggaagtctaaaacggacggcaagcaatgcttggccggcagt
ctgtccaatcgctgcgtgctgctggtcgatacggcgtccagcgcccgcgatgtgctgaag
cagatgctgcacaccttgggcgtgcgctgccggatcgcggattcggtcgaaagcgcgctg
gcggatatcgtcacgtccgatagcgatggtgcgccgttcgattgcatcttgttggactgg
caggtcatgggccaggacatgaaaggcttgagtcggcggataagcggcttgccgctgcgg
cagcggccgccttatctgctggccttgattcaggacgatgtcgagttgcggcaaaaggta
cggcgggccggttttaccgcggaactgaccaagccggtgacgttgtccggtctgcacgat
acgctggtcgacgtgttgcgcggccataaactgccggccgcctcccgtgagaccgggaca
tcgtcggcggaacaggcgttgacgcaaaactgccgtggttgccgcgtgctgctggccgaa
gacaacccgatcaatcagacggtcgccttgacgcttttgaccgatgcggggttgtcggtc
gatgtggcggacgatggcaaaaaggctctggaaatgtgcgagcacggccactacgacctg
attttgatggacatgcagatgccggtcatggatggtttggacgcgacccgtgccatccgg
caattgcccggcggacagcagattccgatattggcgatgacggccaatgccttcggcgaa
gatcgggcccgctgcatgcaggcgggtatgaatgacttcctcgccaaacccgtcgatccg
gatgcgttgtttgcgatgttgttgaaatggttgcctgctcaaaccacgctggtcgatacg
ctggagccggaccgatccgccgaaagtgcgccgcaggcaccggcagtggatttgagccgc
gtgccgggcctggatttgcagcaaggattgaaatgtacgcgcggcgacatcggcagctat
ctgagtttgctcggtcgtttcgtgcgcgagcatggcaacgacgtcgccggggcatgcgaa
cgttatgccgccgccgattacgaggaggccaggcgcttggcgcatacgctgaaaagcgta
tcggcaacgctgggagccggcagcgtaagggcggcggccgcggaactcgagcaagcgatt
ctggcgcggcgcgagcaggcggacatggaacgattggcgcaaaagctggaagacgagtac
cggcgtctggccgcggcggtgctcgatctggaatcgttgtcagcggaagcggaagtggtg
ccgggagaattggattggcccaaactggatgcgatattggatcagctggatgcgttgctg
gagcaaggcaacgtgcgcagcaacgaggtctttcaggaacacgccgccttgctgcatgcg
gccctgggcaagcttgggcaggagctggaacgggcaatagacaatttcgattatccgatt
gcgctggccaggctgcgcgaggctcggcctggcttgccacggtcacgatcatga
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