Methylomonas rapida: NM686_009605
Help
Entry
NM686_009605 CDS
T08781
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mrp
Methylomonas rapida
Pathway
mrp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NM686_009605 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrp03019
]
NM686_009605 (pnp)
03016 Transfer RNA biogenesis [BR:
mrp03016
]
NM686_009605 (pnp)
Enzymes [BR:
mrp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NM686_009605 (pnp)
Messenger RNA biogenesis [BR:
mrp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NM686_009605 (pnp)
Transfer RNA biogenesis [BR:
mrp03016
]
Prokaryotic type
tRNA degradation factors
NM686_009605 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
KH_SLS1_2
DUF6160
S1_2
Motif
Other DBs
NCBI-ProteinID:
WAR46748
UniProt:
A0ABY7GQG0
LinkDB
All DBs
Position
complement(2042157..2044235)
Genome browser
AA seq
692 aa
AA seq
DB search
MNPIRKQFQYGDRLVTLETGEIARQANGAVIIDIEGTTLLVTVVGKKEGSGGDFFPLTVD
YQEKAFAAGKIPGGFFKREGRPSENETLISRLIDRPIRPLFPEGFTNEVQIIATVISLNP
EIDTEVPAILGASAALAVSGLPFMGPLGAACVGYINDQYVLNPTLPQIKESRLRLMVAGT
HKAVLMVESEADLLPEDVMLGAVLFGHEQMQVAINAINEFAAEVATPPMAWTPPADNEAL
KAAVAAEAQASITAAYQIAEKLVRQDTLSAIRASVVEKLTAEDQFAEADVRNAIELLEYN
IVRGAILNDRKRIDGRDLTTVRPISIRTGVLPRTHGSALFTRGETQALVVATLGTERDAQ
IIDALAGEYKDTFLFHYNFPPFSVGETGRTGSPKRREIGHGRLAKRGVQAVLPNMGEFPY
VLRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLIKEGDQFAVLSDILG
DEDHLGDMDFKVAGSENGVTALQMDIKIDGITPEIMKVALEQAKHGRLHILGEMNKALSS
SREQMSDFAPRIISFKIDPAKIREVIGKGGVTIRAITEQTGASIDLSDDGVVNIASVDKA
AGEEAKRMIEEITAEVEVGRTYEGKVVRLMDFGAFVTILPGKDGLVHISQISEERVEKVS
DKLSEGDVVRVKVLEIDRQGRVRLSMKDADSE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctatcaggaaacaatttcagtacggcgatcgtctcgtcacgttagaaaccggt
gaaattgcccgccaagccaatggcgcggtaatcatcgacattgaaggcaccaccttgctg
gtcaccgtggtcggcaaaaaagaaggcagcggcggcgattttttcccattgactgtggac
tatcaagaaaaagcctttgccgcgggcaaaattcccggcggttttttcaaacgcgaaggc
cgtcccagtgagaacgaaaccctgatctcgcgcctgatcgaccgccccatccgcccattg
tttcccgaaggcttcaccaacgaagtccaaatcatcgcgaccgtcatttcgttgaatccg
gaaatcgacaccgaagttccggccatcctcggcgcctccgccgcgctggccgtttccggt
ctaccgttcatgggccccttgggcgcggcttgcgtgggttacatcaacgaccaatatgtg
ctgaacccaaccttgccgcagatcaaggaatcgcgtttgcgcctgatggttgccggcacg
cacaaggccgtactgatggtggaatcggaagccgatttgctgcctgaagacgtcatgctg
ggcgcggtattgttcggccacgagcaaatgcaggttgcgattaacgcgatcaacgaattt
gccgccgaagtcgccacaccgccgatggcctggacgcctcccgccgacaacgaagccttg
aaagccgctgtcgccgccgaagcccaagccagcatcaccgcggcctaccagattgccgaa
aaactggttcgtcaggataccctgagtgccatccgcgcctcggtggttgaaaaactgacc
gcagaagatcaattcgccgaagccgacgtccgcaacgccatcgaattgctcgaatacaac
atcgtccgcggcgcgatcctgaacgaccgcaaacgtatcgacggtcgcgatttgaccacc
gtgcgcccgatcagcattcgcaccggcgtgttacctcgcacccacggttccgccctgttc
actcgcggcgaaacccaggccctggtcgtcgcgacgttgggcaccgaacgcgatgcacaa
atcatcgacgcactggcgggcgaatataaagacaccttcctgtttcactacaacttcccg
ccgttcagcgttggcgaaaccggccgcaccggctcgccgaaacgccgtgaaatcggccac
ggccgtctggctaagcgcggcgtacaagcggtattgcccaacatgggcgaattcccatat
gtattgcgcgtggtttccgaaatcaccgaatccaacggctccagctcgatggcttcggtc
tgcgggagcagcttggccttgatggacgccggcgtaccgttgaaagcccctgtcgccggt
atcgcgatgggcttgatcaaggaaggcgatcagttcgcggtgttgtccgacattctgggc
gatgaagatcacctgggcgacatggatttcaaggtcgccggctccgaaaacggcgtcacc
gcattgcaaatggacatcaagatcgacggcatcacgcccgaaatcatgaaagtcgcgctg
gagcaagccaaacacggtcgcctgcatatcttgggtgaaatgaacaaggccctgtccagc
tcgcgtgaacagatgtccgacttcgcaccacgcatcatctccttcaaaatagaccctgcc
aagatccgcgaagtgatcggcaaaggcggcgtgacgatccgcgcgattaccgaacaaacc
ggcgccagcatcgacctgagcgacgacggcgtggtcaatatcgcttccgtcgacaaggcg
gccggcgaagaagccaaacgcatgatcgaagaaatcaccgccgaagtcgaagtgggcaga
acctacgaaggcaaggtggtgcggttaatggactttggcgcgttcgtcacgatcctgccc
ggcaaggacggcttggtgcacatttctcaaatctcggaagaacgagtcgagaaagtcagc
gacaaactgtccgaaggcgacgtggtccgggtcaaggtcctggaaatagaccgtcaaggc
cgcgtgcgtttgagcatgaaagacgccgatagcgaataa
DBGET
integrated database retrieval system
