Methylomonas rapida: NM686_009950
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Entry
NM686_009950 CDS
T08781
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mrp
Methylomonas rapida
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrp03032
]
NM686_009950
03036 Chromosome and associated proteins [BR:
mrp03036
]
NM686_009950
03400 DNA repair and recombination proteins [BR:
mrp03400
]
NM686_009950
DNA replication proteins [BR:
mrp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NM686_009950
Chromosome and associated proteins [BR:
mrp03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NM686_009950
DNA repair and recombination proteins [BR:
mrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NM686_009950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
TetR_C_30
HU-CCDC81_bac_1
DUF2729
Motif
Other DBs
NCBI-ProteinID:
WAR46810
LinkDB
All DBs
Position
2125456..2125761
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIEVLARKQPHLPLKDVELAVRCVVDHLSDTLASGERIEIRGFGSFSLHHRSARL
GRNPKTGESVALTEKHVPHFKPGKELRDMVDASREKYKIVD
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaatcagaattgatagaggtgttggcacgcaaacagccgcatcttccgcttaag
gatgttgagttagcagtcagatgtgtcgtcgatcatttgagtgacacactagcaagcggt
gagcgtatcgaaatccggggatttggcagtttttccctgcatcatcgttccgcgcgattg
ggcagaaaccctaaaaccggtgaatcggtcgccttgaccgaaaagcacgtaccgcatttt
aaacctggaaaagagctacgcgacatggtcgatgcgtccagggagaaatacaaaatcgtc
gattga
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