Methylomonas rapida: NM686_013770
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Entry
NM686_013770 CDS
T08781
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
mrp
Methylomonas rapida
Pathway
mrp02020
Two-component system
mrp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NM686_013770
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NM686_013770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mrp02022
]
NM686_013770
02035 Bacterial motility proteins [BR:
mrp02035
]
NM686_013770
Two-component system [BR:
mrp02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
NM686_013770
Bacterial motility proteins [BR:
mrp02035
]
Flagellar system
Flagellar assembly proteins
Others
NM686_013770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA
AAA_2
Mg_chelatase
MCM
AAA_16
HTH_20
HTH_24
HTH_28
HTH_11
AAA_19
AAA_3
FleQ
OKR_DC_1_N
MerR
AAA_7
HTH_5
HTH_23
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WAR43444
LinkDB
All DBs
Position
complement(2940251..2941645)
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AA seq
464 aa
AA seq
DB search
MKQYDVLIVEDDIALCEALCDTLELEGYRVLSAKNGIEALSQLQKHAFGLVVSDVQMPVM
DGLQLLQNIRQKFEQLPVLLMTAYGTIPRAVEAMQAGAADYLIKPFEARTLIAKVANRVV
AAPLPEQERVVVDDQMKKLYALVNKVAKTNVTMLLQGESGTGKEVLARYIHRNSHFHNGP
FEAINCAAIPENMLEAMLFGYEKGAFTGAVQSMPGKFEQAQGGTLLLDEISEMDLGLQAK
LLRVLQEKEVERLGSQRKIALNVRILATTNRKLKEYVQQGRFREDLYFRLNVFPIRIPPL
RERVGDILPLANELLDRHSPSGKAKCRFDAAAADKLRAYHWPGNVRELENVVQRALILQG
GNLIGADDLFFEEDEMASLSHDSGVEQLSLVSFEADTAADVDMDGVELQSLGEGVRSAEE
KIILQFLSEASGNRKATAEKLGISPRTLRYKLARMKEAGVAVPC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtatgatgtgttgatcgtcgaggacgacatcgctttatgcgaagcactgtgc
gataccctggaactcgagggttatcgggtgctgtcggcaaaaaacggcatcgaggccctc
agccagttgcaaaaacacgcgttcgggctggtggtcagcgacgtgcaaatgccggtgatg
gatggcttgcaattgttgcaaaatattcggcaaaaattcgagcagctcccggtactattg
atgacggcctacggcaccattccgcgggccgtggaagcgatgcaggcaggggctgcggat
tatttgatcaagcccttcgaagccaggacgttgatcgccaaggttgccaatcgagtggtt
gccgcaccgctacccgagcaagaacgggtggtcgtcgatgatcagatgaaaaaactctac
gctctggtcaacaaggtcgccaagaccaatgtcacgatgctgttgcagggtgagagcggc
accggcaaggaagtattggcgcgctatatccatcgtaattcgcattttcataatggtcct
ttcgaagccatcaactgtgcggcgattccggaaaacatgctggaagccatgctgtttggc
tatgaaaaaggcgcgtttaccggcgccgttcaatcgatgccgggtaagttcgagcaggcg
caaggcggcacgctgttattggatgaaatctctgaaatggatttggggctgcaggccaag
ttgctgcgggtattgcaggaaaaagaagtcgagcgcctgggcagtcaacgcaaaatagcc
ctcaacgtcagaattctggcgaccaccaatcgaaaacttaaagaatacgtgcagcaaggg
cgatttcgggaagatttatatttcaggctcaacgtatttcccattcgaattccgccactg
cgcgagcgggtcggcgatattttgccgctggccaatgaattgctggatagacacagcccg
tccggcaaagccaagtgccgtttcgatgcggcggcggccgataaattgcgggcctatcat
tggccgggtaatgtcagggagctggaaaatgtcgtgcagcgggccttgatcttgcaaggc
ggtaacttgatcggcgcggacgatttgttttttgaagaagacgagatggcctcgttatcg
cacgattcaggcgtcgagcagttaagccttgtgtcgttcgaagccgataccgcggcggat
gtcgatatggacggcgtggaattgcaaagcttgggggagggcgtgcgctcggccgaagaa
aaaatcattttgcaatttctcagtgaggcgagcggcaatcggaaagcgaccgcggaaaaa
ctgggcatcagtccacgcacgctgcgttacaaactcgcccgcatgaaagaggcgggcgtc
gccgtaccttgttaa
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