Methylomonas rapida: NM686_013965
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Entry
NM686_013965 CDS
T08781
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mrp
Methylomonas rapida
Pathway
mrp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NM686_013965 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrp03400
]
NM686_013965 (mutM)
Enzymes [BR:
mrp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NM686_013965 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NM686_013965 (mutM)
DNA repair and recombination proteins [BR:
mrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NM686_013965 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WAR43480
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All DBs
Position
2985934..2986749
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AA seq
271 aa
AA seq
DB search
MPELPEVETSRRGIAPHILGKCFSSVIVRQPRLRWPVPSDLPSTLAGLRLGAVERRGKYL
LLTTEAGTLLLHLGMSGNLRITTPDQPMLKHDHVDFVFDDGTVLRFNDQRRFGAVLWTDQ
AVETHPLLASLGPEPLSAAFGGDYLYACSRNRKTAVKSLIMDSHIVVGVGNIYASESLFL
ARLHPNRAAGDIGLASYQDLSAAIKTVLQRSIDQGGTTLRDFLNAQGKPGYFQQSLSVYG
REGQACLCCAEPIQQLKIGQRASYFCGGCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacccgaggtcgagaccagtcgccgcggcattgcgccgcatattttgggc
aaatgcttcagcagcgtcatcgtccgccagccccggctacgttggccggtcccaagcgat
ctgccgagcacgctggctggattgaggctgggcgcagtcgagcgccgtggcaaatatttg
ttgttgaccaccgaggccggcaccctgttgctgcatttgggcatgtcggggaacttgcgc
atcacgacgcccgaccaacccatgctcaaacatgaccacgtcgatttcgtctttgatgat
ggcaccgtgttgcgttttaatgaccaacgcagattcggcgcggttttatggacagatcaa
gccgtcgaaacgcatcctttgctggcatcactggggccagagcctttatccgctgccttt
ggcggcgattacctgtacgcttgcagccgaaaccgcaagacagccgtcaaaagcctgatc
atggacagccatatcgtggtgggcgtcggcaacatttacgccagtgaatcgctctttctg
gcccgcctgcatcccaaccgcgccgctggcgacatcggcttagccagctatcaagacctg
agcgcggccattaaaactgtcctgcagcgttccatagaccaaggcggcaccacattgcga
gattttctcaatgcgcaaggcaagcccggctattttcaacaatccttatcggtttatggc
cgcgagggccaggcctgcctatgttgcgcggagcccattcagcaactcaaaattggccag
cgtgccagttatttttgtggcggctgccagcgctga
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