Methylomonas rapida: NM686_014260
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Entry
NM686_014260 CDS
T08781
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mrp
Methylomonas rapida
Pathway
mrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NM686_014260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrp03400
]
NM686_014260
Enzymes [BR:
mrp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NM686_014260
DNA repair and recombination proteins [BR:
mrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NM686_014260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
RsgA_GTPase
nSTAND3
HHH_2
NTPase_1
HHH
PIF1
T2SSE
AAA_16
AAA_28
AAA
cobW
MobB
SLFN-g3_helicase
MMR_HSR1
AAA_29
PhoH
ATP_bind_1
ABC_tran
MeaB
NACHT
AAA_18
AAA_7
SRP54
NPHP3_N
AAA_5
TrwB_AAD_bind
TsaE
CbiA
KOW6_SPT5
AAA_24
AAA_14
AAA_17
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WAR43535
LinkDB
All DBs
Position
complement(3039855..3042050)
Genome browser
AA seq
731 aa
AA seq
DB search
MTSQAAPAHADNPVEKLHGSIERVTFHSEASGFCVLRVKVKGYRELITVIGSAASVTAGE
YIECLGCWVNDRQHGQQFKTISLKIVPPTTLDGIEKYLGSGMVKGIGPHFAKKLVKAFGE
QVFDVIEQTPERLLELPGIGKKRQERVTSAWAEQKVIREIMVFLQSHGVGTSRSVRIYKT
YGDQSIEKVRENPYRLALDIHGVGFKTADTLAQKLGIGPQSLLRAQAGVRHVLQEWSGEG
HCAAIRSKLCEMAAKLLEIPLSIIDQAIAAELTEGNLIAEIDGSDEFIFLTPLHRAEIGC
AAHLNRLNQGDAPWGVIDADKAIPWVEEQTGMTLSQSQAAAVRLVLQHKVSVITGGPGVG
KTTLVNSLLKILKAKRVRIGLCAPTGRAAKRLAESTGMEAKTVHRLLEFDPTQFAFKHND
ENPLDLDCLVIDESSMMDVVLMNQLLKAIPTEAAVLIVGDVDQLPSVGPGSVLADIIDSG
QIATVRLTEIFRQASTSKIITNAHRINQGQMPLVDKTEGISDFYCLYAETPEEIFAKLMQ
VVLERIPQRFQFHPVNDVQILTPMNRGGLGARSLNIELQARLNGHSEPKITRFGNTYAPG
DKVIQRINNYDKEVFNGDIGVIKSIDLEESQVKIVFDDREVDYEFSDLDEITLAYATSVH
KSQGSEYPVVVIPMAMQHFMLLERNLLYTGVTRGKKLVVVIAQPKALAMAVKNQQSQRRI
THLAARLVKNS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacaggctgcgccagcgcatgcggacaatccggttgaaaaactgcacggctcc
atcgagcgcgtgacgtttcatagcgaggcctcgggattttgcgtgttgcgggtcaaagtc
aaaggctatcgggaactgattaccgtgatcggttcggctgctagtgtcacagcgggtgaa
tacatcgaatgcctgggttgttgggtgaacgatcgccaacatggccagcaattcaagacc
atttccttgaaaatcgtgccgccgaccacgttggacggtatcgaaaaatacctgggttcc
ggcatggtcaaaggtatcggtccccatttcgccaaaaaactggtcaaagccttcggtgag
caggtgttcgatgtgatcgagcagacaccagaacgcctgctggaattgccgggtatcggc
aagaaacgccaggagcgggtgaccagcgcctgggcggaacagaaagtgattcgggaaatc
atggtctttctgcaatcgcatggtgtcggcacctcgcgttcggtgcgcatttacaaaacc
tacggcgaccaatccatcgagaaagtgcgcgaaaatccctatcgtctggcactggatatc
cacggtgtcggttttaaaaccgccgatactttggcacagaagctgggtatcggcccgcaa
tccctgctgcgcgcccaagcgggtgtccgacatgtattgcaagaatggtccggcgaaggc
cactgtgccgcgattcgcagcaagctgtgcgaaatggcggcgaaattattggaaattcca
ttatcgattatcgaccaagccatcgccgctgaattgaccgaaggcaatttgattgccgaa
atcgacggtagtgacgaattcatttttctgacgcccttgcaccgcgctgaaatcggttgt
gccgcccacctgaatcgattgaatcaaggcgatgcaccgtggggtgtgattgatgcggat
aaagccataccctgggtggaagagcaaaccggcatgaccttatcgcagtcgcaagcggct
gccgtacgattggtactccagcataaagtctcggtgatcactggcggccccggtgtcggt
aaaaccaccctggtcaacagtctgctcaagattctcaaagccaaacgagttcgaatcggt
ttgtgcgcgccgacggggcgagcggcaaaacgcttagcggaatcgaccggcatggaagcg
aaaacggtgcatcgcttactggagttcgatccaacgcagttcgcgttcaagcataacgac
gaaaacccgctagacctcgattgcctggtgatcgatgagtcgtcgatgatggacgtggtg
ttgatgaatcagctgttaaaagccataccgacggaggctgcggtcttgatcgtcggagat
gtcgatcaattaccctcggtcggtccaggatcggtgttggccgacattatcgattccggt
caaattgccaccgtgcgtctgaccgaaattttccgtcaggccagtacctccaaaatcatt
accaatgcgcaccggattaaccaagggcaaatgcctttggtggataagactgaaggcatc
agcgatttttattgcctctacgccgaaacacctgaggagattttcgctaaattgatgcaa
gtcgtcctcgaacggattccgcagcgtttccagtttcatccggtcaacgacgtgcaaatt
ttgacgcccatgaatcgtggtggtctgggagcgcggtcgttgaacatcgaattgcaagca
cggctaaatggacacagcgaaccgaagattacccgtttcggcaacacctatgcgcccggt
gacaaggtcattcagcgaatcaacaactacgacaaggaagtgttcaacggcgacattggc
gtgatcaaatccatcgatcttgaggaaagccaggtcaagatcgtattcgatgatcgggaa
gtagactacgaattcagtgatctggacgaaattacgctggcttacgccaccagtgtgcac
aagtcgcaaggctccgaatatcccgtggtagtgattccgatggccatgcagcactttatg
ctgctggaacgcaatctgctgtataccggcgtcacgcgtggtaaaaaactggtcgttgtg
attgcccagcccaaggcattggctatggcagtgaaaaaccaacaatcacagcgaaggatc
actcatctggctgcgaggctggttaaaaattcgtga
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