Methylomonas rapida: NM686_015170
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Entry
NM686_015170 CDS
T08781
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mrp
Methylomonas rapida
Pathway
mrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NM686_015170 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrp03400
]
NM686_015170 (recC)
Enzymes [BR:
mrp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NM686_015170 (recC)
DNA repair and recombination proteins [BR:
mrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NM686_015170 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WAR43711
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All DBs
Position
3219360..3222818
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AA seq
1152 aa
AA seq
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MSTNARTLLDNGIAVIHSNHLETLRDVVEYWLRQHPLAPLENEVFLVQSNGMGQWLKQSL
AQNDALGIAAAMQVQLPSLFIWSVYRAVLGQQIPKEQPLAKAPLSWRLYRLLPILTGEKG
FESLAHFLQQDLDDRKRHQLAEQLADLFDQYQVYRSDWISDWAAGHDHLRNAHGETFPLP
EQQRWQAILWRAILADLGENFNPFASRASVHAQFMAHIDTLQQRPVGLPRRIMLFGLSSL
PQQSLEVLAKLGKFCQIVLFVHNPCQHYWADIIEDKELLKAQRRRQSYKAGMSSSLSAEE
LHLHANPLLAAWGKQGRDYIRLLDHFDETTAYANWHWPEQKIDLFKDYGADGQRCLLQRL
QQSILDLEPVPPEPQLLDHADSSLAFHVAHSPQREVEILHDQLLARFNAAAQAGEPLTPR
DVIVMVPDINQYAPHIRAVFGQVQADDPRYIPFSLADQQQRGENPLLVAVEALLHLPESR
FSVSEFLALLEVPALRLRFDIGENAIPKLHQWLEQAGIRWGLNADHRARSADMPANFVAN
TWQFGLRRMLLGYAVGNGEAFNGIEPYAEIGGLEAQWLGHLCHLLDTLARYTDTLRTQRN
PDDWLLILDQLLAEFFLADNERDRKTLDSLNRALTTWHQACTQGGCTAADKLPLNVVREA
WLATVDEPNLQQRFLSGRVNFCTLMPMRAIPFRLICLLGMNDGDYPRSHYPHGFDLMNQR
GQYRPGDRSRRQDDQFLFLEALLSAREQLYLSWVGRSIRDNSERPPSVLIAQLRDFISQS
WRLQEPQDLLDALTLEHPLQPFSPDYVKKNRNARLFTYAKEWFQTVPEAIIDDVPPAPGE
ENAYSLTLEALARFLRAPVKSYCQQTLKFSFDSDDVTSEDNEPFGFDRLQAQAYSTSLLD
GLQRQEPIDVAEFLHGQMTTLRGQGKLPLGGFAETTFAGIAQPAQQAWQHYQTVLKAWPD
TLKARQIELTFEVSDTVNIRLEAGLGHLRQAGDTQAMALITLTARTLRKDKRIQYQHLLL
PWLQHLAACADGTAVDSLVVGADGVIEMPALPRDDARACLQILLEGWHRGLHAPLPVACL
TAFVWLHEPDNAQARYEGDEWNDGELDYDAYLARFFPTFASLCQSETDGFAFWAEKLYRP
MTLNLQAKDLLA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacgcccggacactattggataacggcatagccgtgatccattcgaatcat
ctggaaacactgcgggacgtggtggaatactggctacgtcagcatccgctcgcgccgctg
gaaaacgaagtgtttctggtgcaaagcaacggcatgggccaatggttgaaacaaagtctg
gcgcaaaacgacgcgctcggcattgccgccgcaatgcaagtccagttgccgtcgctgttc
atctggagcgtttatcgggcggtattgggccaacaaatcccgaaagaacagcctttggcc
aaagccccgctcagttggcgcctgtaccgcttgctgccgatactgaccggtgaaaagggc
ttcgaatcactcgcccatttcctgcaacaggaccttgatgatcgcaagcgtcaccaactg
gccgaacaattggccgacttgttcgaccaatatcaggtttatcgttcggactggatcagc
gactgggcagccggtcacgatcatttacgcaatgcgcatggcgagactttccccttgccc
gaacaacaacgctggcaagccattttgtggcgcgcgatactggcagacctgggcgagaac
ttcaatccctttgccagccgcgcttcggtccatgcgcaattcatggcgcatatcgacacc
ctgcaacaacgtccagtcggccttccgcgccgcatcatgctgttcggcctgtcgtccctg
ccgcaacaatcgctggaggtattggccaagctgggtaaattttgtcagatcgtgctgttc
gtgcataacccctgtcagcattactgggccgacatcatcgaagacaaggaactgctcaag
gcccagcgccgccggcaaagctacaaggccggcatgagctccagcctgagcgctgaggaa
ctgcatctgcatgccaatccgctactcgccgcctggggcaagcaaggccgcgattacatc
cgattgctggatcattttgacgaaaccacggcctacgccaactggcattggcccgagcaa
aaaatcgatttgttcaaggattacggtgcggacggtcagcgctgcttgttgcaacgccta
cagcaatcgattctggatctggaacctgtcccgccagaaccgcaattgctggaccatgcc
gactcttcactggcctttcatgtcgcgcatagcccgcaacgggaagtggaaatcctgcac
gatcagctgctggcgcgcttcaacgccgccgcgcaggcgggcgaaccactgactccgcgc
gacgtcatcgtgatggtgccggacatcaaccaatacgcgccgcacattcgcgcggtattc
ggccaggtgcaagccgacgaccccagatacatcccgttcagcctggccgatcaacaacaa
cgcggcgaaaatcctctgctggttgcggtggaagcacttttgcacctgcccgagtctcgt
ttcagcgtcagtgaatttctcgccttgctcgaagtaccggctttacggctgcgtttcgac
atcggcgaaaacgccatccccaaactgcaccaatggctggaacaagccggcatccgttgg
ggcctgaatgccgaccatcgtgcccgcagcgccgacatgccagccaattttgtcgccaac
acctggcaatttggcttgcgccgcatgttgctgggttatgccgtcggcaacggcgaagcc
ttcaacggcatagaaccttacgcagaaatcggcggcctcgaagcgcaatggctgggacat
ttatgtcatctgctggacacattggcgcgttacaccgacacgctacgaacgcaaagaaat
ccggatgattggctacttatcctcgaccagctgctagcagagtttttccttgccgacaac
gagcgcgaccgcaaaaccctcgatagcttaaaccgcgcgttgaccacctggcatcaggct
tgcacgcaaggaggctgcacggcagccgacaaactgcccttgaacgtggtgcgcgaagcc
tggctggccacggtggacgaacccaatctacagcaacgcttcctgagcggccgggtcaat
ttctgcaccttgatgccgatgcgggcgattccatttcgcttgatatgcctgctgggcatg
aacgacggcgattatcctcgcagccactatccgcacggtttcgatttgatgaatcagcgc
ggacagtaccgccccggcgaccgctcgcgccggcaggacgatcaatttctgtttctggaa
gccctgctttcggccagagagcagctttacctcagctgggtgggccgcagcattcgcgac
aacagcgaacggccgccgtcggtcctgatcgcgcaattacgcgatttcatcagccaaagc
tggcgcctgcaggaaccgcaagacttgctcgatgccttgacgctggagcatcccttgcag
cccttcagccccgattacgtcaagaaaaaccggaatgcgcgtttgttcacctatgccaag
gaatggtttcaaacggttcccgaagcgatcatcgacgatgtcccccctgcccccggcgaa
gaaaacgcttacagcctaacgctggaagcgctggcgcgatttttacgcgcgccggtcaag
agctactgtcaacaaaccttgaagttcagcttcgatagcgacgatgtgaccagcgaagac
aacgaacccttcggcttcgatcgcttacaagcccaggcatacagcacatctctgctggat
ggtttacagcggcaggaacccatcgatgtggccgaatttctgcacggacaaatgacgacc
ttacgcggacaaggcaaactgccgctcggcggctttgccgaaaccaccttcgccggtatc
gctcaacccgctcagcaagcctggcaacactaccaaaccgttctgaaagcctggcccgat
acgttgaaagcccggcaaatcgagttgaccttcgaggtctcggacacggtcaacattcga
ctggaggccggactcggccatctgcgccaagccggcgacacgcaagccatggcgctcatc
acgctgaccgcgcggactttgcgcaaagacaagcgcatccaatatcagcatctgctgctg
ccctggctgcagcatctcgccgcttgcgcggacggcacggcggtcgatagccttgtggtg
ggcgccgacggcgtgatcgagatgcccgctttgccgcgcgacgacgccagggcctgttta
caaattttgctcgaaggctggcatcgcggtttgcatgccccattgccggtagcctgcctg
acggcttttgtctggttgcatgagccggataacgctcaagcacgctacgaaggcgacgaa
tggaacgacggcgagcttgattacgacgcctatctggcgcgttttttcccgactttcgcc
agtctgtgccagagtgaaacagacggcttcgcgttctgggccgaaaaactctaccgaccc
atgactttaaatctgcaagcaaaggatttactagcatga
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