Methylomonas rapida: NM686_016280
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Entry
NM686_016280 CDS
T08781
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
mrp
Methylomonas rapida
Pathway
mrp00630
Glyoxylate and dicarboxylate metabolism
mrp00680
Methane metabolism
mrp01100
Metabolic pathways
mrp01120
Microbial metabolism in diverse environments
mrp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NM686_016280 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
NM686_016280 (fdhF)
Enzymes [BR:
mrp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NM686_016280 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_9
Fer4_10
Fer4_6
Fer4_2
Fer4_8
Fer4_15
Fer4_4
Fer4_16
Fer4_13
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
WAR43914
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All DBs
Position
3457028..3459880
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AA seq
950 aa
AA seq
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MSANKEIDYGTPASSSENQVTLEIDGRQVTVNAGSSVMRAAAEAGITIPKLCATDSLDPF
GSCRMCLVQIEGARGYPASCTTPVAEGMKVCTQNDKLASIRRGIAELYISDHPLDCLTCA
ANGDCELQDTVGAVGLREVRYGFDGENHLNAEKDTSNPYFTFDPSKCIVCSRCVRACEEV
QGTFALTIDGRGFESTVSPGQDQPFMESECVSCGACVQACPTATLMENSVIENGQPEHST
ITTCAYCGVGCSFRADMKGEQLVRMVPDKNGGANHGHSCVKGRFAFGYATHKDRITTPMV
REKISDPWREVSWEEAIQFAADKLKGIQAKYGKDAIGGITSSRCTNEETYLVQKLIRAGF
GNNNVDTCARVCHSPTGYGLKTTFGESSGTQTFDSVMQADVIMVIGANPTDGHPVFGSLM
KRRLRQGAKLIVVDPRSIDLVRNSPHVKADYHLKLRPGTNVAVVTALAHVIVTEGLVDEQ
FALERCDVESFTKWKAFVAKPENSPEAVAELTGVPAETLRAAARLYATGGNGAIYYGLGV
TEHSQGSTTVIGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHEFVGYRHVSD
TATRAQFEAAWGVSLASEPGLRIPNMFAAAIDGSFKGLYVQGEDIAQSDPDIQHVHHALR
ELDCLIVQDIFLNETAKFAHVFLPGSSFLEKNGTFTNAERRISPVRKVMTPLAGKEDWEV
TQDLANALGLPMNYNHPSEIMDEIARLTPQFAGVSYEKLDRMGSIQWPCNDEAPEGTPIM
HADQFVRGKGRFMLTEYVATEERTSSKYPLILTTGRILSQYNVGAQTRRTANVAWHEEDR
LEIHPHDAEVLGIADGDWVGVKSRTGETVLRALITDRMQPGVVYTTFHFPHSGANVITTD
NSDWATNCPEYKVTAVHVAKVAQPSEWQKQYQDFSDNQLSLLDNRIVANT
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaataaagaaatcgattacggcacgccagccagttcgtccgaaaatcaagtc
actctggaaatcgatgggcgccaggtcactgtcaatgccggcagctccgtcatgcgcgca
gccgccgaagccggcatcacgataccaaaactctgcgccacggacagccttgacccgttt
ggctcctgccgcatgtgcctggtgcaaatcgagggcgcgcgcggctatccggcttcttgc
accacgccggtcgcggaaggcatgaaagtctgtacccagaacgacaaactggccagcatc
cgccgcggcatcgccgaactttacatttccgaccatccgctggattgtttgacttgcgcc
gccaacggcgactgcgagctacaggacacagttggtgcagttggcctgcgcgaagtccgt
tacggtttcgacggcgaaaaccatttaaacgccgaaaaagataccagcaatccgtatttt
accttcgatccatccaaatgcatcgtctgctcgcgttgcgtgcgcgcttgcgaggaagtt
caaggcacgtttgccttgaccatagacggccgcggcttcgagtccacggtttcgccgggt
caagaccaacccttcatggaatccgagtgcgtctcctgcggcgcttgcgtacaagcctgc
ccgaccgcgaccctgatggaaaattccgtgatcgaaaacggtcaacccgaacacagcacc
atcaccacttgcgcctattgcggtgtcggctgctcgttccgcgccgacatgaagggcgag
caactggtgcgcatggtgccggataaaaatggcggcgccaaccacggccattcctgtgtg
aaaggtcgtttcgccttcggttatgccacgcacaaggaccgtatcaccacgccgatggta
cgggaaaagatttccgatccatggcgcgaagtcagttgggaagaagccatccagtttgcc
gcggacaaactaaagggcattcaagccaaatacggcaaagacgccatcggtggcatcacg
tcgtcgcgctgtaccaacgaagaaacctatctggtgcaaaaactgatccgcgctggcttt
ggcaacaacaacgtcgatacctgcgcccgcgtctgccattcgccgaccggttatggcctg
aaaaccaccttcggcgaatcgtccggcacccagactttcgattcggtcatgcaagctgat
gtcatcatggtgataggcgccaatccaaccgatggccatccggttttcggttcgttgatg
aaacgccgtttgcgtcaaggcgccaaactgatcgtggtcgacccgcgcagcatcgatctg
gtgcgcaacagcccgcacgtgaaagccgattatcatctgaaattgcgtcccggcaccaac
gtcgccgtcgtcaccgcactagctcatgtcatcgtcaccgaaggtctggttgatgagcaa
tttgcgctcgaacgctgcgacgtggaatccttcactaaatggaaggctttcgtcgccaaa
ccagaaaactctccggaagccgtggccgaactaaccggcgtgcctgcagaaaccctgcgc
gcggccgcccgtttgtacgcgaccggcggcaatggcgcgatttactatggcttgggcgtc
acagaacacagccaaggctcgaccacggtgatcggcattgccaacctggcgatggccacc
ggcaacatcggccgcgaaggcgtcggcgtcaatccgttgcgcggtcaaaacaacgtgcag
ggttcttgcgacatgggctcgttcccccatgaattcgtcggttaccgccacgtatcggat
acagccacccgcgcccaattcgaagcggcttggggagtctcgctggcgtcagaaccgggt
ctgcgcattcctaacatgttcgccgccgcgatcgacggcagtttcaaaggcttgtacgtg
caaggcgaagacatcgcacaatccgacccggacatccaacacgtgcatcacgcgttgcgc
gaactggactgtctgatcgtgcaggacattttcctgaacgaaaccgccaaattcgctcac
gtgttcctgcccggctcttcgttcctggagaaaaacggcaccttcaccaacgccgagcgc
cggatttcgccggtgcgtaaagtaatgaccccgctggccggcaaggaagattgggaagtg
acccaagacttggccaatgcactgggcttgccgatgaattacaaccatccgtcggaaatc
atggatgaaatcgctcgcctgaccccgcaatttgccggtgtcagctacgaaaaactcgac
cgcatgggcagcatccagtggccctgcaacgacgaggccccagagggtacgcctatcatg
catgccgatcagttcgttcgcggcaagggccgtttcatgttgaccgagtatgtcgccacg
gaagaacgcaccagcagcaagtatcctttgattctgaccaccggccggatcttgtcgcaa
tacaacgtcggcgcgcaaacccgccgtaccgcgaacgtggcttggcacgaagaagacagg
ttggaaatccatccgcacgatgccgaagttttgggtatcgccgatggcgactgggttggc
gtcaagagccgtaccggcgaaaccgtgttgcgggcattgatcaccgatcgtatgcaaccg
ggcgtggtttacaccactttccacttcccgcattccggtgccaacgtcatcaccaccgac
aactcggattgggcgaccaactgccccgagtacaaggtaaccgccgtgcatgtggccaag
gtggctcagccttcggaatggcaaaaacaataccaggacttttccgacaatcagttgtca
ttgttggataaccgtatcgtcgccaatacctaa
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