Moniliophthora roreri: Moror_13280
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Entry
Moror_13280 CDS
T03137
Name
(GenBank) dna-directed rna polymerase ii subunit rpb1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mrr
Moniliophthora roreri
Pathway
mrr03020
RNA polymerase
mrr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Moror_13280
09124 Replication and repair
03420 Nucleotide excision repair
Moror_13280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrr03021
]
Moror_13280
03400 DNA repair and recombination proteins [BR:
mrr03400
]
Moror_13280
Enzymes [BR:
mrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Moror_13280
Transcription machinery [BR:
mrr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
Moror_13280
DNA repair and recombination proteins [BR:
mrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Moror_13280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-ProteinID:
ESK84660
UniProt:
V2WWW0
LinkDB
All DBs
AA seq
1806 aa
AA seq
DB search
MLGHQFAFSSAPIRKVKEVQFGILSPEEIKAYSVAKIEHPEVMDEATHKPKMGGLMDPRM
GTIDRNFKCQTCGEGMAECPGHFGHIELARPVFHPGFIVKVKKILECICVNCGKLKADIS
DPNFADKIRHIRDPKKRMAVVWAHCKTKMICEPDDPKEEGAEPEADEPKKGHGGCGHIQP
LVRKEGLKLFLQYKKPKDDDEEVKSMQPDKRLMTPSEVYTTFKKMSDSDLHLIGLSEDYA
RPEWMILTVMPVPPPPVRPSIAVDGGAMRSEDDLTYKLGDIIKASANVRRCEGEGAPAHV
ISEFEQLLQFHVATYMDNDIAGIPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFS
ARTVITGDPNLELDEVGVPRSMAMNLTFPERVTPYNIAYLQELVRNGPTTYPGARYVVRD
TGERIDLRYNKRADAFLQYGWVVERHLKDGDYVLFNRQPSLHKMSMMSHRVRLMPYSTFR
LNLSVTPPYNADFDGDEMNMHVPQSEETRAELAQVAWVPRQIISPQANKPVMGIVQDTLC
GIRKFTLRDTFLDWHQVQNILLWVPDWDGTVPIPTILKPKPLWTGKQILSMTIPRGINIH
RSPDPKSSNPVFDDGILIENGEIIFGIVEKKTVGASQGGLVHVVFREKGPEATKQLFTGL
QMIVNYWLFHNGFSIGIGDTIADTKTMAYITQNIAERKANVSKIIDDATHDRLKAAPGMT
IRESFESLVERQLNLARDSSGQYAQKNLKEDNNVKQMVVAGSKGSFINISQMSVCVGQQS
VEGKRIPFGFRHRTLPHFTKDDFSPEARGFVENSYLRGLTPQEFFFHAMAGREGLIDTAV
KTAETGYIQRRLVKALEDVMVCYDGTVRNSLGDLIQFVYGEDGMDGAFIEKQSIETFGLN
DKEFEHNYRVDVTDPSGGFLPGVLQIGLDDSSLELQSKLDEEYAALVEDRRTLRNFIFPR
CDPSINQYLPVNLSRIVQNAIQIFHIDRRKPSDLEPAYIIDAVKALCERLIVVRGNDLLS
REAQDNATLRFRMHLRATFASRRVLEKFHLNREAFEWVLGEVESKFNQSLVNPGEMCGTL
AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVATNIKTPSLSVYLEPQVGLD
AVLAKNVQQELAYTSLRTVTAAVEIWYDPDPSSTIIEEDQLFVESFFAIPDEEVESKLHL
QSPWLLRLELDRAKMIDRKLTMNYVASRIAESFKTDLFVIWSEDNSEKLVIRCRVLGGGD
KEDDGMESVEEDIFLRQLENTMLNSVSLRGVPGIHRVFLMRHDRVEEREDGSLVTEKEKE
WVLETDGVNLKAVMCIEGVDFKRTYSNSCVEVFNVLGIEGARAGIMKELRNVIEFDGSYV
NYRHLALLCDLMTHRGTLMAITRHGINRADTGALMRCSFEETVEILMEAAAVGEKDDCQG
VAENVMFGQMAPMGTGAFDVALDIDMLKDAIVDHRLPVQSMLAAQVDGGMTPGQVAMTPY
DSNSPIWQDHAFKADQAAFSPLAVNGGDESSNFQWLPYGQSPLGAGGMSPAGPGYSPSSP
NAYSPTSPGFVPQSPFGGATSPFGTSPYATSPFYDPGRGATSPTYSPTSPAFNPTSPGYS
PTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRYSPSNPYPDVTII
TEVLSDITYGFPVVAEILTYLAGLFPSVTCILAGITSVQSDFTILVSLEPISEPEWSRAS
ESLLPVIAILGLIFYLGPFFRICSFTTYVSTYSLSMLCSKHVDYQHHLLSFKIVVHVARP
IYRGPF
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgctaggccaccagtttgcgttttcttctgctccaatccgcaaggtgaaggaggtacag
tttgggattctctctccggaagagattaaagcctactctgtagccaagatcgagcacccc
gaagtcatggacgaggcaactcacaaacccaaaatgggcggactgatggatcctcggatg
ggaactatagaccgtaatttcaagtgtcaaacatgtggtgaaggtatggcagagtgtcca
ggtcacttcggacatatagagttggcgaggcccgtctttcaccctggctttattgtcaaa
gtgaagaagattttggagtgtatatgtgtaaactgtggaaagctgaaagccgacatctcg
gatcccaacttcgcagacaagatacgacatattcgcgatcctaaaaaacgcatggctgtc
gtttgggcgcactgcaaaacgaaaatgatttgcgagcctgatgatccaaaggaggaaggt
gctgaacccgaagcggatgagcctaagaaaggccacggtggttgcggtcacatacaacct
cttgtcagaaaggaaggcttgaagctgttcttgcaatacaaaaagccaaaggatgacgac
gaggaggtcaaatcaatgcaacctgacaaacggctgatgacgccctcggaggtctacacg
acgttcaagaagatgtcagattctgaccttcatctgattggtttgtcagaggactatgca
cggcccgaatggatgatcttaactgtgatgcctgttccgccgcctcccgtccgaccgagt
attgctgttgatggtggcgcaatgcgaagtgaggatgacttgacgtacaaactaggcgat
ataatcaaagcttctgcgaatgtgcggcgatgcgagggtgaaggtgcacctgcgcatgtt
atatcggaatttgaacaactactacagttccatgttgcgacgtatatggataacgacatt
gctggtatacctcaggccctccagaagtcaggtcgtcctgtcaaggccattcgtgcgcgt
ctaaaggggaaggaaggtcgtctgagaggaaacttgatgggaaagcgtgtcgacttttcg
gcgcgtaccgtcatcacaggtgaccctaacctcgagctggacgaagtcggtgttccaagg
agtatggccatgaatttgacattcccagaacgagtcaccccatacaatatcgcatacctt
caggaactagtgcggaatggtccgactacttaccctggtgcgcggtatgtcgttcgagat
actggtgaacgaatagatctgcgatacaataagcgcgcggatgctttccttcaatatggt
tgggtagttgaaaggcatctaaaggatggagactatgtcttatttaatcgacaacccagt
ctgcacaaaatgagtatgatgagtcacagggtacgcctcatgccctattccactttccga
ctgaacctttccgttacgcccccttacaatgcagattttgatggtgatgaaatgaacatg
cacgttccgcaaagtgaagagactcgagctgagctcgctcaagtagcctgggtaccacga
cagatcatttcgccgcaagccaacaagccagtcatgggtatcgtccaggatacactttgt
ggtattcgaaagttcacgctgcgagacacgttcctcgactggcatcaagtccaaaacatt
cttctctgggtaccggactgggatggcacggtgccaataccgactatcctgaaacccaaa
cctctttggacggggaagcagatccttagtatgacaattcctcgcggtatcaacattcat
cgttcccccgacccaaagtcttccaatcccgttttcgacgatggtattctgatcgagaac
ggagaaatcatcttcggtattgtcgagaaaaagaccgtcggtgcttcacagggtggtttg
gtccacgtcgttttccgtgagaagggtcccgaggccaccaaacagctctttacggggttg
cagatgattgtcaactattggctcttccacaatggctttagtatcggcatcggtgatacc
atcgctgacaccaagaccatggcctacatcacgcagaacattgcagagcggaaagccaat
gtctcgaagatcatcgatgatgctacgcacgatcgtctcaaagcggcacctggtatgacg
attcgtgaatccttcgagagtctagtcgagcgccagctcaacttggctcgcgattcgtct
ggtcaatacgctcagaagaacttgaaggaggacaacaacgttaagcagatggtggtcgcc
ggttccaagggttccttcatcaacatttcacagatgtccgtctgtgtcgggcaacagtct
gtggaaggcaaacgtattccattcggcttccgtcatcgcacgctcccacactttacgaag
gacgatttcagtcccgaagctcgtggtttcgtggagaattcgtaccttcgaggattgaca
ccgcaggagttcttcttccacgccatggctggtagagaaggtctgattgatactgctgtc
aaaaccgccgaaactggttacatccagcgtcgtctcgtgaaggcactggaggatgtcatg
gtgtgctatgatggtacagttcgaaactctttgggcgatctcattcagtttgtctacggt
gaagacggaatggatggtgcttttatcgagaagcagagcatcgaaactttcggtctcaat
gacaaggaattcgagcacaactaccgtgttgatgtcaccgatcccagcggtggcttcctt
cctggtgtgctgcaaatcgggctcgatgacagctccttggaactccagagcaagcttgat
gaggagtatgcagctctcgtcgaggaccgccgaacacttcgtaacttcatcttccctcgt
tgcgacccctcgataaatcaataccttcctgtcaatctatcgcgtattgtccaaaatgcg
atccagatcttccacatcgaccgcaggaaacccagtgacctcgagcctgcctatattatc
gatgcagtaaaggctttgtgcgagcgacttatcgttgttcgtggtaatgaccttttgagt
cgggaagctcaagacaacgcgacgttacgtttccgaatgcaccttcgtgcgactttcgct
tctcgacgtgtcctcgagaagttccatctcaatcgggaagccttcgagtgggtgctgggt
gaagtggagagcaagttcaaccaatccctggtcaatccaggagagatgtgtggaaccctg
gcagcacaatctatcggagagcctgccacacagatgacgctcaacactttccactatgct
ggtgtgtccagtaagaacgtcacactcggtgttcctcgattgaaggagatcatcaacgtg
gctaccaacatcaagacaccatcgctgtctgtgtatcttgagccccaagtgggtcttgat
gcagtcttagcgaaaaacgtgcaacaggaacttgcatacacatcactccgtactgtcact
gccgccgtcgaaatttggtatgatcccgatcccagttccactatcatcgaagaagatcag
ctcttcgtcgagtctttcttcgctattccagatgaagaggtcgaatccaagttgcacctg
caatcaccctggctactccgtctggagttggatcgtgcaaagatgattgatcgtaagctg
accatgaactacgtggcaagccgtatcgccgagagcttcaagaccgacttgtttgtcatc
tggagtgaagacaactccgagaagctggttattcgttgccgtgtattgggtggaggagac
aaggaagacgatggtatggagtccgttgaggaagacatcttcttgcggcaattggagaat
acaatgttgaactcggtcagtcttcgtggtgtgccaggcattcatcgtgtcttcttgatg
agacatgacagagttgaggagagggaggatggtagcctagtcactgagaaggaaaaggag
tgggtgctggagacggatggtgtcaacctgaaggctgttatgtgcattgaaggcgttgac
ttcaagcgcacatactccaacagctgtgtagaggtcttcaacgttctcggtatcgaaggt
gctagggcgggcatcatgaaggagcttcgtaacgtcatcgaattcgacggttcatacgtg
aactacaggcatttggcccttctctgtgaccttatgacacatcgcggcaccttgatggca
atcacccgtcatggcatcaatcgtgctgataccggagcgctcatgagatgttcgttcgag
gagacagttgagattcttatggaagcagctgccgttggagaaaaggacgattgtcaagga
gtcgcggaaaacgtgatgtttggtcaaatggcacccatgggtaccggtgcattcgacgtc
gctttggacattgacatgctgaaggatgccatcgtggaccatcgcctgcctgttcagtcc
atgttggccgctcaagttgacgggggaatgacgcctggacaggtagcaatgacaccgtac
gattccaattcgccaatttggcaagatcatgcattcaaggcagaccaagccgcattctct
ccgttggcggtcaatggaggggatgaatcaagcaacttccaatggctgccttacggtcag
agtccacttggtgcaggcggaatgtcaccggccggtcctggttacagcccaagttcaccg
aatgcttactctcccacatcccctggctttgtgccccagtcacccttcggtggcgcgaca
tcaccatttggaacatcgccgtatgctacatcgccgttctacgatcctgggcgcggcgca
acatcgcctacctattctccaacgtcgcctgctttcaatcccacgtcgccagggtactcc
ccaacaagtccgagatactcgccgacatcgccatcgttctcgccgacgtcgcctcggtac
agccctcaatcaccttcattcagtcctacctcaccgcggtactcgccgacaagtccgtct
ttcagtccagcatcaccacgttattccccaagcaacccctacccagatgtcaccatcatc
accgaagtactctccgacatcacctatggcttccccgtcgtcgccgaaatactcacctac
ctcgccggcttattccccagcgtcacctgcatactcgccggcatcaccagcgtacagtcc
gacttcaccatcctggtctccctcgagcccatctcagaaccagaatggagccgcgcatcg
gagtcactcttaccagtcatcgccatcttgggattgattttttatctgggaccttttttt
cgtatttgctcttttacgacatacgtatctacctatagcctttctatgctttgcagcaaa
catgtagactaccaacaccaccttttaagtttcaagatcgttgtgcatgttgcccgtcct
atctatcgcgggcccttctga
DBGET
integrated database retrieval system
