Moniliophthora roreri: Moror_14838
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Entry
Moror_14838 CDS
T03137
Name
(GenBank) pre-mrna-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mrr
Moniliophthora roreri
Pathway
mrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Moror_14838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrr03019
]
Moror_14838
03041 Spliceosome [BR:
mrr03041
]
Moror_14838
Messenger RNA biogenesis [BR:
mrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Moror_14838
Spliceosome [BR:
mrr03041
]
Complex B
Other components
Prp19-related factors
Moror_14838
Complex C
Moror_14838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Mad3_BUB1_I
TPR_15
TPR_12
TPR_2
ARM_TT21_C
NRDE-2
TPR_NPHP3
DALR_1
DUF2225
Motif
Other DBs
NCBI-ProteinID:
ESK88316
UniProt:
V2X696
LinkDB
All DBs
AA seq
994 aa
AA seq
DB search
MPSVAEKRLSLDDLQSIFPLTNPIPHPNTTPNLITSKDLLREEDLLRNPQSFRAWWTAIH
TAREAFTFQSRDESSNLPEETATFLGPLATPYARISLQRLTYLYESALVQFPNSFKLWKS
YLTMRISFVLGKQIVKKRAGGRKKFPEMKDALEDEKEDIEQWEGGLHPIIGWEEWKALVA
VFERALMWLPKLPRLWSMYFSIFFHPKCPSVLSHTHARRTFDRALRTLPPSLHSRIWTRY
LVWAESQGGATTVAVFRRYIAVDPSITEYYTNLLLSPSSGAPRPLEAAKLLLSLARKAAR
GEYTSPEGKSPYQLLGDWIDVVEKFSDDVGLDVEETDESHKAAAREEEEKEAQNQADEEP
ASVDGKLIRVAGPPVAVDSDGKALPAYDEDVDPLSSRKLNIERIIEKDGFGVYKDQAGRL
WTGLATYWIKRGEFDRAKETFEKGLASVLTIRDFTQIFDAYSEFSESLISAMMESLADEE
DEEDAAETEKELDIRMKEFEELMDRRPFLVNDVLIRRNPNDVQEWEKRVALWGTDDKRVA
ETYTQALETIMPRKATANLHRLYVNFAKFYEEGGTTGQAEEDLDSARKILEKATKVNFKA
VEDLAEIWCEWAELEIRHENYDEAIRVMQRAAAIPKNTKINYHDHSLSVQARLFKSLKLW
SFYVDLEESLGTVETAKQVYDKILELRIANAQIIINYAAFLEDNKYFEESFKVYERGVEL
FTFPVSFEIWNIYLSKFVKRYGGTKIERTRDLFEQALEKCPAKSCKSIFLMYGKFEEEHG
LIKRAMSIYERGCQVVADEDKFEMYTIYIAKATANFGLPATRPIYERALEVLPDRQTAEM
CLRFAALERKLGEIDRARAIYAHASQFCDPRVNEKFWKEWNDFEIETGSEDTFREMLRIK
RSVQAQFNTEAHYLAAQTIAAKNGTGGNGGKAASIAEVPDAMAAAEKQAATGGPAFVAAT
KTAIHRLAEEADDAASAAAAANADEIHISDDEDI
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgtggctgaaaaacgactgtcgttggacgacctccagtctatattccctctc
acaaacccgatacctcacccaaataccaccccaaatctcatcacctcaaaagatttgctt
cgggaggaagatttactccgaaatcctcagtcttttcgcgcatggtggactgcaattcat
actgccagggaagcgttcacttttcaaagcagagacgaatcttcgaaccttcctgaggag
accgctacttttctgggtccacttgcgaccccgtacgcgcgtatctctctacaacgactt
acatacttgtacgaatcggcgctagttcagttcccaaactcgttcaagctatggaagtca
tatctgacgatgcgcatatcgtttgtgctagggaagcaaatcgttaagaagagagcgggt
ggcaggaagaagtttccagagatgaaggacgcgttggaggatgaaaaagaagacattgag
cagtgggaaggtggcctgcacccaataattggctgggaggaatggaaagctctggtagca
gtctttgagcgtgcgctcatgtggctaccaaagttgcctcgtctatggtcgatgtacttt
tccatattttttcaccccaagtgcccttccgttctcagccacacgcatgcacggagaaca
ttcgacagagcattgcggactcttcccccttcccttcattctcgtatatggacgcggtac
ctcgtctgggccgagtctcaaggtggtgcgactacggtagccgtattccgtcgttacatc
gcggttgaccctagtatcaccgaatattacactaatctccttctttccccttctagcggc
gctcctcgcccactagaagccgccaaactgctcttgtcgttggcccgtaaagctgctcgt
ggagagtatacaagtcctgaaggcaagagtccatatcagctattgggtgactggattgat
gtggtagaaaaattctctgatgacgtcggtctcgacgtggaagagaccgatgagtcacac
aaagctgctgctagagaggaggaagagaaggaagcacagaaccaggccgacgaagagccg
gcatctgtagatggaaaactcattcgcgtggctggacctccggttgcagtcgactcagat
ggcaaagcgcttcctgcctatgatgaggatgtggaccccttgagttcgcgaaaactcaat
atcgaacggataatagagaaggacggcttcggtgtttacaaggatcaagccggacgtctc
tggacagggctggctacgtattggatcaaacgtggagagtttgaccgcgctaaagagact
tttgagaaaggtcttgccagtgttctaacaatacgcgatttcacgcagatattcgatgcc
tactccgaattttcggagtctctcatcagtgcaatgatggagagtctcgcggatgaggag
gatgaagaggatgccgcggaaactgagaaggagctcgatattcggatgaaggagtttgaa
gaattgatggacaggcggccgttcttagtcaatgacgttttgattaggaggaatccgaat
gacgttcaagaatgggagaaacgggttgctttgtggggtacagacgacaaaagggtggca
gagacttacactcaggcactggagacaatcatgcctcgaaaggcgaccgccaacctacac
cggttatatgtcaattttgccaaattttacgaagaaggcggcactactggacaagccgag
gaggatcttgacagcgcccgtaagatcctagagaaggctactaaggttaacttcaaagcg
gtagaggatttagcggaaatatggtgcgaatgggctgagttggagatcagacatgaaaat
tatgatgaagctatccgggtcatgcaacgagctgctgctatacccaaaaacaccaaaatc
aattatcacgatcattccctatccgtacaagctcgccttttcaagtcattgaagctgtgg
tcattctatgttgatcttgaggaatctttgggtaccgtggaaaccgcgaagcaagtatac
gacaaaattttggaactaagaattgccaatgcccagatcattatcaattatgccgctttc
ttggaggataataagtactttgaagagagtttcaaggtatacgagcgaggcgtcgaactc
tttaccttcccggtatccttcgagatatggaatatctacctatccaagttcgttaagcgt
tatggcggtaccaagattgagcgtaccagggatctcttcgagcaagctctggaaaagtgc
ccggcgaaatcatgcaagtctatcttcctgatgtacggtaagtttgaggaagagcatggt
ctcatcaagcgagccatgtctatatacgaacgtggatgccaggtcgttgctgatgaagac
aagtttgagatgtacacaatttatatcgcaaaagcgactgcaaacttcggcttaccagca
actcgacctatttatgaacgtgctttggaagtccttcctgaccgccaaaccgctgagatg
tgcctgcgcttcgctgctttggaacgcaagctcggcgagatcgatcgtgcacgcgccatt
tacgctcacgcatcccaattctgtgaccccagagtcaacgagaagttctggaaggagtgg
aatgactttgaaattgagactggatccgaagatacctttcgagagatgcttcgtatcaag
cgaagtgtacaagcgcagttcaacaccgaggcccattacctcgcggctcagactattgct
gctaaaaatggaaccggagggaacggagggaaggctgccagtatcgcagaggtgccggat
gctatggctgctgctgagaaacaggcggcaacaggcgggcccgcatttgttgctgctacg
aagactgctatacatcgactggcggaagaggcggacgatgcggcgtcggccgctgctgcc
gccaatgctgacgagatacatatatcagacgatgaggatatttga
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