Moniliophthora roreri: Moror_6602
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Entry
Moror_6602 CDS
T03137
Name
(GenBank) exosome complex exonuclease rrp4
KO
K03679
exosome complex component RRP4
Organism
mrr
Moniliophthora roreri
Pathway
mrr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Moror_6602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrr03019
]
Moror_6602
Messenger RNA biogenesis [BR:
mrr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Moror_6602
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Moror_6602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-ProteinID:
ESK97024
UniProt:
V2YZ86
LinkDB
All DBs
AA seq
312 aa
AA seq
DB search
MIAFTSFPPPQDISNKTHVLEDEDEMDIDEDEFFESGGLKLAWPGESLTSAQAYMRGHGT
YVDNDQVIASVAGVVERVNKLITVRPVGTRYNPEVGDLVVGRITEVQARRWKVDANSRQD
AVLMLSSVNLPGGVQRRKLESDELQMRTFFEEGDLLVAEVQAFFGDGTMSLHTRSLSYGK
LRNGQLVTVPPILIRRLKSHFISLPCGVDLILGLNGYIWISKHVKESEREGEEGFDAQAV
YSNRNDTIDNSTRVAISRVTNIITVLAAHSIPLTNTVLLEAYEWSVEHEDDPKDLLQDDV
GDALVARVVARG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccttcacctccttcccaccaccccaggatatctcaaataaaacacatgtacta
gaagatgaagatgagatggatatcgacgaagatgaatttttcgagagcgggggtttgaag
ttggcttggcctggagaatcactcacgtccgcgcaagcgtatatgcggggtcatggaaca
tatgttgataacgatcaagttattgcgtctgtcgcaggagttgtggaaagggtgaacaag
ttgatcactgttcggccggtggggacgagatataatccagaagtcggtgaccttgtcgtg
ggtagaatcacagaagttcaggctcgtagatggaaggtcgacgcaaattcaaggcaagat
gctgtcctgatgttatcgtccgtcaacttgccaggtggtgtgcagagacgaaaacttgaa
agtgacgagcttcagatgcggacgttctttgaagaaggtgatcttttagtagcagaggtg
caagccttctttggagatggtacaatgtcgcttcatactcgttctcttagctatggaaag
ctacgaaatggtcaactagtcacagtaccacccatcctcattcgacgactcaaatcgcat
ttcatatcacttccatgtggcgtggacctgatcttggggttgaacgggtacatatggatt
agcaaacacgtcaaagagagtgaacgcgaaggcgaagaaggctttgacgcgcaagctgta
tactccaaccgaaacgacacaatcgacaactcgactcgagtggcgatatcaagagtcaca
aacatcatcactgttctggcagcacactcaatacctctgacgaatactgtcctccttgaa
gcgtacgagtggtcagtagaacacgaggatgatcccaaagatttgctacaagatgatgta
ggtgatgcattagtagctagagtagttgcaagaggataa
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integrated database retrieval system
