Moniliophthora roreri: Moror_8080
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Entry
Moror_8080 CDS
T03137
Name
(GenBank) putative pre-mrna cleavage factor cfi subunit
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mrr
Moniliophthora roreri
Pathway
mrr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Moror_8080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrr03021
]
Moror_8080
03019 Messenger RNA biogenesis [BR:
mrr03019
]
Moror_8080
Transcription machinery [BR:
mrr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Moror_8080
Messenger RNA biogenesis [BR:
mrr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
Moror_8080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
ARM_5
Motif
Other DBs
NCBI-ProteinID:
ESK94422
UniProt:
V2XL01
LinkDB
All DBs
AA seq
626 aa
AA seq
DB search
MSMYSSPAYYSQPPYGGPQSYAQSPSGYPPFYHPPHSHQPAPVFHHVDPATFRRDFSNRL
AELTMNSRPIIQSLSMYAQDHVRFAEIVAQCLEAHIRKVPPWMKLPSFYLLDMISKNIYE
PYARVFAGFVIPLFIETYQQVDNSTRSKMVELVLTWRTGSPTGKELFGVPAQVSIERSIW
AYSSSGQITKAQVLSELEFTLGQKERALQANPADLTAQNHVNVLQQLRKLVEAGVSQAEL
QQILGQLRTLMRSATQPPPPPAHAAPPPQPAWLPFPSTPSSVAPSAQPSFTPPVTNVQLE
TVPVASSSIIPDQPSLPTAGPSFAALLSTLVKSGVVSAGGTPTGAGATAKEEASNTNIAE
ASAEREAIQEYRSLILNQSAQLSTTGLTRTRPSIHTLLYRRLSAQCKQCGIRFPDTTNGK
KDLQDHLDMHFRQNLKANQNIGRGHSRSWFIDPEDWTHDISDVKGKGRADGHRPLNPRAA
AAAEAIKKDAELRAQFVVIPPGDEAKTIACPICKEILNPEFVEDDEEWVWKNAVKKDDRI
YHATCHAEASSNTLAARLRSDVPSSRSRSGTPEKITKQSTPPRGSSLSPETRIAGMKRKA
NDENSSIKGEPEGRPHLKKLALAVVS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtattcctctccggcgtactacagccagccaccttacggtggcccccaatct
tatgctcaatcccccagcggatacccaccgttctatcatccccctcattctcatcaacct
gctcccgtttttcaccatgtggatcctgccacttttcgaagagatttctctaataggcta
gcagaactgactatgaattctcgcccaattattcagagcctttccatgtatgctcaagac
cacgttcggtttgcggagattgtagcgcagtgcttggaggcccacattcggaaggtgcca
ccatggatgaagttaccatctttctacctcctggacatgatttccaagaacatctacgaa
ccctacgctcgtgtattcgcaggcttcgtcatacctctgttcatcgagacgtatcagcaa
gttgataattctacccggagcaaaatggtcgagcttgtcctcacatggcgtactggatca
ccaacaggaaaggaactctttggagtacctgctcaggtttccattgagcggagtatatgg
gcatactcctcttcgggtcaaatcacaaaggcccaggtcctcagtgaactcgaatttacc
cttggtcagaaagaaagggctttgcaagctaatccagcagatctaacggcacagaatcac
gtcaatgtgcttcaacagttacgcaaacttgtcgaagctggcgtttctcaagcagaacta
caacagattctcggacagttacgaacattgatgcgcagcgccactcagcctcctcccccg
ccagcacatgcagcaccgccccctcaacccgcttggctcccatttccgtctacgccatca
agtgttgctccgtcggctcagcccagcttcactcctcccgtcaccaatgtacaattagaa
acagttccagtcgcgtcatcgtccataattccagatcaaccatcgttaccaactgctggt
cccagttttgccgctctcctttcgactctcgtaaaatcgggtgtcgtatccgcaggtgga
acaccaacaggagcgggtgcaacagcaaaggaagaggcatcaaatacaaacattgctgaa
gccagcgcagagcgtgaagccatacaagagtatcgctctctcatactcaatcaatctgcg
caactcagcacaacagggcttacaagaacgcggccgagtatacataccctattgtatcgc
agactatcggctcaatgtaaacaatgtggtattcgttttcccgatacaaccaatggcaag
aaagatttgcaagaccaccttgacatgcacttccgacagaatctcaaagctaaccagaac
atcggccgaggtcacagccgaagttggtttattgatccagaggattggacgcatgatata
tctgatgtcaaaggcaagggtcgggcagatggccatcgaccactcaacccgagagcggcg
gcggcggcagaagccatcaagaaggatgctgaacttcgtgcacagttcgttgtcataccc
cctggagacgaagccaaaactattgcctgtcccatctgcaaggaaatcttgaaccccgag
ttcgtcgaggatgacgaagaatgggtgtggaagaatgctgtgaagaaggatgatcggata
taccatgcaacatgtcatgcggaggcgtcaagtaatacattagcagcacgcttgcgttct
gatgtaccatcgagtcgaagtcgttcgggaacacctgagaagataaccaagcagtcaact
cctcccagaggctcgtcgttatcgcctgaaaccagaattgcaggtatgaagcgtaaggcc
aacgacgagaattcttcgataaaaggtgaacctgaaggtagacctcatctgaaaaaactt
gctctcgcagtggtctcatga
DBGET
integrated database retrieval system
