Allomuricauda ruestringensis: Murru_0037
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Entry
Murru_0037 CDS
T01598
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mrs
Allomuricauda ruestringensis
Pathway
mrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Murru_0037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrs03019
]
Murru_0037
03009 Ribosome biogenesis [BR:
mrs03009
]
Murru_0037
Enzymes [BR:
mrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Murru_0037
Messenger RNA biogenesis [BR:
mrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Murru_0037
Ribosome biogenesis [BR:
mrs03009
]
Prokaryotic type
rRNA helicases
Murru_0037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEM69095
UniProt:
G2PQW3
LinkDB
All DBs
Position
33672..35432
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AA seq
586 aa
AA seq
DB search
MTKFEALGLDKPLLDAISDLGFESPSEVQEKSIPVLLEKETDLVALAQTGTGKTAAFGFP
MIQKIQEESRTTQGLILSPTRELCLQITNELKLYSKYIKGLNVVAIYGGASITEQARQIK
KGAQIVVATPGRMKDMIGRRMVDISKIDYCVLDEADEMLNMGFFEDIKDILSNTPKEKLT
WLFSATMPKEVATIAKKFMNNPVEITVGSKNAGASTVQHEYYVVGGRDRYAALKRLADAN
PGIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQRDLVMNSFRKKQVQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIITRSELRKIKAIEKK
IQQEFIAKQIPDGIEICEIQLYHLANKIKETKINKEIESYLPAINDVLEGIDRDELIKKI
VSVEFTQFYNYYSKSKDLNSQDSSKDRGTSKGDIPSEGSVRYFINVGERDGYDWMSLKDF
LRDTLKLEKEDIYNVDTKDTFSFFNSDAQLTEFILQTFTEFKVDGRFINVEVSKNPGGSG
GGGKGGKKRRGKKGGGYRGGNKSYKGGGGKKGSYGKKGGKKKQGFY
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttgaagccttggggttggacaaacccctattggatgctatttccgacctc
ggatttgaatccccatcagaagtacaagaaaaatcaatcccagttttattggaaaaggaa
accgatttggtggccttggcacaaacaggaacaggtaaaactgctgcgtttggatttccg
atgattcaaaaaatccaagaagaaagccgaaccacccaaggattgattctctccccaaca
agagagctatgtttacagattacaaacgagttaaaactctattccaaatacataaaagga
cttaatgttgttgccatttatggtggcgccagcattacggaacaagcacgacaaataaaa
aaaggagcgcagattgttgttgctactccaggtcgtatgaaggatatgatcggccgaaga
atggtagatatttccaaaattgattattgtgtcttggatgaagccgatgaaatgttgaac
atgggcttctttgaagacattaaagacattctatccaacactcccaaagaaaagttgacg
tggcttttttctgcaaccatgcccaaagaagtggctacgattgccaaaaagttcatgaac
aatcctgttgagatcactgttggatctaaaaatgcaggtgcatccaccgtacagcatgaa
tattatgtggtaggcggacgtgaccgttatgcagcgcttaagcgtttggcagatgccaat
ccgggaattttctccgtggtgttctgcagaaccaaaagggatacgcaacgtgtggctgaa
aaattgattgaggatgggtacaatgccggagctttgcatggcgacttgagtcaaaaccaa
agagatttggtaatgaactcgttccgaaagaaacaggtacaaatgttggtagctaccgat
gttgctgcccgtggtattgatgtggacgatattacacacgtaatcaactaccaattgccc
gatgaaattgaaacctacacccaccgtagtggacgtacaggacgtgctggcaaatccggt
atctccatggttatcatcacccgctccgaacttcgcaagatcaaagccatcgagaaaaag
attcagcaggaattcatagccaaacagattccggatggcattgaaatctgtgagattcag
ttgtatcatttggccaataaaatcaaggaaaccaagatcaataaagagattgagagttac
ctacccgccattaacgatgttttggaaggtattgaccgtgacgaactcatcaaaaaaatt
gtttccgtagaatttacccagttttataactactacagtaaatccaaagaccttaacagt
caggattccagtaaggacagaggaacttccaaaggagatattccatcagaaggttcagtt
cgctattttatcaatgttggggaacgcgatggttacgactggatgtctttgaaagatttc
cttcgtgacacgttaaaattggaaaaagaggatatctacaatgtagacacaaaagacacc
ttctcgttctttaattctgatgcacaactgaccgaatttattcttcaaacctttaccgaa
ttcaaggtagatggccgttttattaatgttgaagtatccaaaaaccctggcggtagcggc
ggtggcggaaaaggaggcaaaaaacgtcgtggtaaaaaaggtggaggataccgcggtggg
aataaatcctacaaaggcggaggcggaaaaaaaggaagttacggaaaaaaaggaggcaag
aaaaagcagggcttttattag
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