Allomuricauda ruestringensis: Murru_0482
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Entry
Murru_0482 CDS
T01598
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mrs
Allomuricauda ruestringensis
Pathway
mrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Murru_0482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrs03021
]
Murru_0482
03019 Messenger RNA biogenesis [BR:
mrs03019
]
Murru_0482
Transcription machinery [BR:
mrs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Murru_0482
Messenger RNA biogenesis [BR:
mrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Murru_0482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
DDHD
AAA_22
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
AEM69536
UniProt:
G2PSQ9
LinkDB
All DBs
Position
485111..486730
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AA seq
539 aa
AA seq
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MFEISDLKAKKLPELQEIAKGLNVPKFKSLKKLDLVYQILDVQASNPKAVAETVTSTTDE
KPAPAPKKPRAPRPKATEAKSTEGDAPKKAPQKREPRSKKDDSKPQGKPQKKDNKPQDNK
SQDNKSHSSSQKNQNTRRSNQHNKPHHDKKNSNFDKDLRNRYKEPEYEFDSIIESEGVLD
IMQDGYGFLRSSDYNYLSSPDDIYVSQSQIRLFGLKSGDTILGNIRPPKEGEKYFPLIKV
NKINGLDPQVVRDRVAFEHLTPLFPKEKFKLAEKQSTISTRIMDLFSPIGKGQRGMIVSQ
PKTGKTMLLKDIANAIAANHPEVYQIILLIDERPEEVTDMQRNVRGEVVASTFDKEATEH
VRVANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALHKPKR
FFGAARNIENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRRISNRRIFPAID
LISSSTRRDDLLLDENTIQRMWIMRKYLADMNPIEAMEFMEQRIKQTKNNEEFLLTMNE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagatttcagatctaaaagctaaaaagcttcctgagttgcaagaaattgcaaag
ggtcttaatgttcccaaattcaaatcattgaaaaaattggacctggtttaccaaatattg
gacgttcaggcttccaacccaaaagctgttgcagaaacggttacatcaaccacagacgaa
aagcctgccccagcaccaaaaaaaccaagggctccacgccccaaagccacggaagcaaaa
agtacagagggtgacgctcctaaaaaagcgcctcaaaaaagagagcccagaagcaaaaag
gacgactccaaaccacaaggaaaacctcaaaaaaaggacaacaagccgcaggacaacaag
tcacaagacaataagtcccacagcagctcccaaaagaatcaaaacactaggaggagcaac
caacataacaagccccaccacgacaaaaagaacagcaattttgacaaggacttgagaaac
aggtacaaagaacctgaatatgagttcgatagcattattgagagtgaaggtgtgttggat
attatgcaggatggctacggattcctaaggtcttccgattacaactatctttcttctccc
gacgatatttacgtttcccaatcgcaaatacgattgttcggacttaagtccggggatacg
atcttgggcaatattcgccccccaaaagaaggtgaaaaatatttcccgttgatcaaagtg
aacaaaataaatggattggacccacaagtggttcgagacagggtagcttttgaacacctt
accccgttgttccctaaggaaaagttcaagttagcggaaaaacaaagtaccatttccaca
cgtatcatggatttgttctcccctattgggaaaggacaaagaggaatgattgtttcccag
cccaaaacgggtaagaccatgttgctgaaggatattgccaacgccattgcagctaaccac
cccgaagtgtatcaaatcatcttattgatcgatgaacgccccgaagaggttaccgacatg
cagcgtaacgtgcgtggcgaagtagttgcttctacttttgacaaagaagccaccgagcac
gtaagagttgccaatattgtattggaaaaagcaaaacgattagtagaatgtggtcatgac
gtagtgatccttttggattccattacacgtttggcccgtgcctataataccgtacaacca
gcatctggtaaagtattgagtggtggtgtggacgcgaatgcactacataaaccaaaacgt
ttctttggtgcggcccgtaacattgaaaatggtggatcattgtccattattgcaacggcc
ttgaccgaaaccggttccaaaatggacgaggttatctttgaggaattcaagggtacaggt
aacatggagcttcaattggacagaagaatctccaacagaaggattttccctgccatcgac
cttatttcttcctctacacgaagagacgatctgttgttggacgaaaacaccattcaacgt
atgtggatcatgcgcaaatatcttgcagatatgaaccctattgaagctatggagtttatg
gaacaacgcataaagcaaaccaagaacaacgaggagtttttactcaccatgaacgagtaa
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