Allomuricauda ruestringensis: Murru_1233
Help
Entry
Murru_1233 CDS
T01598
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mrs
Allomuricauda ruestringensis
Pathway
mrs03410
Base excision repair
mrs03430
Mismatch repair
mrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Murru_1233
03430 Mismatch repair
Murru_1233
03440 Homologous recombination
Murru_1233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrs03400
]
Murru_1233
DNA repair and recombination proteins [BR:
mrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Murru_1233
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Murru_1233
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Murru_1233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
LsmAD
Motif
Other DBs
NCBI-ProteinID:
AEM70276
UniProt:
G2PNU1
LinkDB
All DBs
Position
complement(1339730..1341418)
Genome browser
AA seq
562 aa
AA seq
DB search
MRWTIKPKPAQEAIDHLSNALKVEGLIAQLLLQRGITDYEGAKAFFRPELSHLHDPFLMK
GMDKAVERIQQAMANKENILVYGDYDVDGTTSVALMSSFLMETYPNVATYIPDRYLEGYG
ISFQGIDFAGDNDISLIIALDCGIKAIDQIKYAKEKGIDVIVCDHHRPGEILPDAVAILD
PKQKDCEYPYKELCGCGVGFKLIQALGSKQGKTIDDLLLYLDLVATAIAADIVPITGENR
VLAYYGLLVINENPRTGIKALIDQTKKRELTITDVVFIIAPRINAAGRMKHGQHAVNLLT
ELDFAQAKQFASEIELFNTERRSLDQEITQEALVQIQENQEEERFTSVVYNENWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVKGFDIYNALEGCSDCLEQFGGHMYAAGLT
LLEEQYEAFKTQFEKVVSETIDPQLLQPEISVDAKIGMHQITPKLMRILKQFAPFGPGNM
TPIFMAEGLKDTGYARGVGEGGKHLKCSVYQSGSNPFGGIGFNLGNKIDKVKGVQSFDAV
FSLDENEWNGTVSLQIKLRDIR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaccataaaaccaaaacctgcacaagaggccatagaccatctttccaatgca
ttgaaagtagaaggtctaattgcacagctattgcttcaaagaggcatcactgattatgaa
ggagccaaagcattctttcggccagagctgtcccatttgcacgacccttttttgatgaag
ggtatggacaaggccgtggaacggattcagcaagccatggccaataaggaaaacatattg
gtttatggagattatgatgtggatggaacaacttcggtagccttgatgagctcctttctg
atggaaacatacccgaatgtggccacgtacattcccgaccgttatttggaagggtatgga
atatcctttcagggaattgactttgcgggagataatgacatcagtcttattattgcctta
gattgtgggattaaagcgattgatcagataaaatatgccaaggagaaaggaatagatgtt
attgtgtgcgaccatcacaggccaggggaaattttaccggacgcagtggccattttagac
cctaagcaaaaagattgtgaatacccgtataaagaactttgcggttgcggggtcggtttt
aaattgattcaggctttgggatctaaacaaggcaaaactattgatgatcttttactttat
ctggatttggtggcgaccgcaatcgcagccgacattgttcccattacaggagaaaatcgt
gtgctcgcctattatggattgctcgtgattaacgaaaacccaagaacaggcataaaagcg
ctgatcgatcagaccaaaaaaagggaactcaccataaccgatgtggtcttcatcattgcg
ccgcgcattaatgccgctgggcgtatgaagcacggtcagcatgcggtaaacctgctaacc
gaattagactttgcccaagcaaagcagtttgcctccgaaattgaattgttcaataccgag
cgacgaagtttagatcaagagattacacaagaagccttggtgcaaatacaagaaaaccag
gaagaggaaaggtttacctctgtggtctacaacgaaaattggcataaaggggtgataggc
attgtggcttcgaggcttaccgaaacctattacagacccacactggtctttaccaaaagt
ggggataaattggcggcttcggcccgttccgtaaaaggatttgatatttacaacgccttg
gaaggctgttccgattgtctggaacaatttggaggacacatgtacgcagcaggtttgaca
ctcttggaagaacagtacgaagcgtttaaaacacagtttgaaaaggtagtatcggaaacc
atcgacccacaactactgcaacctgaaatttctgtggatgccaaaatcggaatgcatcaa
attacgccaaaattgatgcgcatcttaaaacaatttgctccttttggccccggaaacatg
acgcccatttttatggcagaaggattaaaggacacagggtatgcccgcggtgtaggtgaa
gggggaaaacatttaaaatgcagtgtgtatcagtccggttccaatccatttggtggcatt
ggatttaatttgggcaataaaatagacaaagttaagggcgtacaatcttttgatgccgta
ttttcgttggatgaaaatgaatggaacggaacggtgagccttcaaattaaactaagagat
attcgctag
DBGET
integrated database retrieval system
