Allomuricauda ruestringensis: Murru_2165
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Entry
Murru_2165 CDS
T01598
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mrs
Allomuricauda ruestringensis
Pathway
mrs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Murru_2165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrs03021
]
Murru_2165
03400 DNA repair and recombination proteins [BR:
mrs03400
]
Murru_2165
Enzymes [BR:
mrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Murru_2165
Transcription machinery [BR:
mrs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Murru_2165
DNA repair and recombination proteins [BR:
mrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Murru_2165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BSH_YknX
RPOC_hybrid
Apocytochr_F_C
BSH_RND_rel
BSH_RND
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AEM71204
UniProt:
G2PMA7
LinkDB
All DBs
Position
2371088..2375386
Genome browser
AA seq
1432 aa
AA seq
DB search
MARIKDNNAQKRFNKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKGPEGEEINKMDFLTEEEYLNILESIPTENQY
LEDTDPNKFIAKMGAECLIDILSRIDLEQLSYELRHKANTETSKQRKTEALKRLQVVEAL
RESQNNRENNPEWMIMKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQEAVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELKLYECGLPKDMAAELYKPFIIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLACTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKEKKSTKEE
PVLGEGLTFYSSEEVEIAFNEKKVSLNAGIKVRAKDFNEEGELVYQIIETTVGRVLFNTE
VPEQAGFINQVLNKKALRNIIGDILAVTDVPTTAEFLDKIKAMGYDFAFKGGLSFSLGDI
IIPAEKQDMIGEANEQVDGIMMNYNMGLITNNERYNQVIDVWTSTNAMLTELAMKRIRED
KQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNSEDCETLRGIEVEPLKKNE
EIVETLGERILGRVSLHDVYNPLTEELVLKAGQEINEADVKRVEAAPIEKIEVRSPLTCE
APQGICAKCYGRNLATNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDNK
LESKFDGIAEIEDLRLVKGENSEGGKTDIVISRTSEVKIVDPKTGITLSTNNIPYGSKLF
IKNGEKITKGTVICEWDPYNGVIVSEFSGQIAYENLDQGVTYQVEIDEQTGFQEKVISET
RNKKLIPTLLIKDSKGETLRSYNLPVGSHLMVDDGEKVKEGKTLVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKTGDIKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILAIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVKIQDPGDTIFLENQLVHKDDFINENDEIFGKKVVEDAGDSERLKPGQILTVREL
RDENSILRREDKTLVTARDAVAATATPILQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKIDTLEGLKENVIVGHKIPAGTGMRDYDSIIVGSKEEYDEIMARKEEFKF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggctagaataaaagataataacgcacaaaaaaggttcaacaaaatttccataggattg
gcctctccagagtcaattttggccgagtcccgtggcgaggtgttgaagccggaaaccata
aactatagaacgcacaaaccagagcgtgatggattgttctgcgagcgtatttttggtcct
gtaaaggattacgaatgtgcctgtggtaaatacaagagaatccgttaccgtggaatcgtt
tgtgaccgttgtggtgttgaagtgacggagaaaaaagtacgtagagaccgtgtagggcac
attaatcttgtggttcccgtggcacacatctggtacttccgttcgctgccaaacaaaata
ggataccttttgggactgccttccaaaaagttggacatgattatatactacgaaaggtat
gtggttatccagccaggtattgccaaaggtccagaaggtgaggaaatcaacaaaatggat
ttcttgaccgaggaggagtacttgaacattttggaatccattcctaccgagaaccaatac
ttggaggataccgatcccaacaagttcattgccaaaatgggtgccgaatgtttgattgac
attttgtccagaatcgatttggaacaattgtcctacgaacttcgtcataaggcaaacaca
gagacttcaaaacagcgtaagaccgaagccttgaagcgtcttcaggtagttgaggcttta
cgtgagtcacaaaacaacagggaaaacaaccctgagtggatgattatgaaggtgattccg
gtgattccaccagaattgcgtccgttggtgccattggatggggggcgtttcgccacatcc
gatttgaacgacttgtaccgcagggtgattatccgtaacaaccgtttgaagcgtttgatg
gaaatcaaagcaccagaggtgattttgaggaacgaaaaacgtatgcttcaggaagcggtg
gattcccttttcgataacacaagaaaagcatctgcggtaaaaacagaatccaacagacca
ttgaaatccctttccgattcattgaaaggtaagcaaggtcgtttccgtcaaaaccttttg
ggtaaacgtgtggattactccgctcgttccgtaattgttgttgggccggaattgaaattg
tacgaatgtggtcttccaaaagatatggcagccgagctttacaagccattcatcatccgt
aagttgattgaaagaggtattgtaaagaccgttaaatctgccaaaaagattatcgacaag
aaggaacccgtagtttgggacattcttgaaaacgtccttaaaggacaccctgtattgttg
aaccgggcccccacattgcacagattgggtatccaagcgttccagcctaaacttattgaa
ggtaaggcgattcgtttgcatccattggcatgtaccgcatttaacgcggattttgatggg
gaccagatggcagttcacttgccattggggccagaggctattttggaagcacaattattg
atgttggcttcacaaaacatccttaacccagccaacggttctccgattaccgtaccatca
caggatatggttttgggattgtactacatgaccaaagagaaaaaatctaccaaagaagaa
cctgttttgggtgaaggacttaccttctattcttctgaagaagtagagattgcctttaac
gagaaaaaagtttcgcttaatgccggaatcaaggtaagagccaaagactttaacgaagaa
ggggaattggtctatcaaattatagaaaccacggtaggtcgtgtattgttcaacacagaa
gtgccagaacaagcaggattcatcaaccaagtattgaacaagaaagccctaagaaatatt
attggggacattcttgcggtgacagatgtacctacaaccgctgagtttttggacaagatc
aaggccatgggatacgatttcgcctttaaaggtggtctatcctttagtttgggggatatc
atcattccagcagaaaagcaggatatgatcggcgaggcaaacgagcaggtcgatggtatt
atgatgaactataacatgggtcttatcaccaacaatgagcgatataaccaggttattgat
gtttggacatctaccaatgccatgttgaccgaattggccatgaagcgaattcgtgaagat
aaacaaggattcaactcggtatatatgatgttggattctggtgcaaggggttccaaagag
cagattcgtcagttgaccggtatgcgtggtttgatggccaagcctaaaaaatctaccgca
ggtggtggggagattatcgaaaacccgattctttcgaactttaaggaaggattgtcgatt
ttggaatactttatctctacccacggtgcgcgtaaaggtcttgcggataccgctttgaaa
acggcggatgcaggttacttgaccagacgtttggtggacgtttcacaagatgttatcgtt
aatagcgaagattgtgaaaccttgagaggtatcgaggtagaaccattgaagaaaaacgag
gagattgttgaaaccttgggcgaaaggattttgggcagggtatcgttacacgatgtgtac
aacccattgaccgaagaacttgtgctgaaagcaggacaagaaatcaacgaagccgacgtg
aaaagggtggaggcagctccaatcgaaaaaatagaagtaagatctccattgacatgtgag
gctccacaaggaatctgcgccaaatgttacggtagaaaccttgctaccaataaaatggta
caacgaggtgaagccgtaggtgttgttgcagcacagtccattggtgagcccggtacacag
ttgaccttgcgtaccttccacgtgggtggtattgcaggtaacatttccgaggacaacaag
ttggagtccaagtttgatggtattgcagagattgaagacttgagacttgtaaaaggtgaa
aacagtgaaggtggtaaaaccgacattgtaatttccagaacgtccgaggttaagatagtt
gatccaaaaacaggaatcacattaagcacaaacaacattccttacggttctaaattgttc
atcaaaaacggtgagaaaattacaaaaggaaccgtgatttgtgaatgggatccatataac
ggtgtaattgtttctgagttctctggacagattgcctacgagaaccttgatcaaggtgtt
acttaccaagttgaaatcgatgaacaaacaggtttccaagaaaaagtaatttctgagacc
agaaacaaaaagttgattccaaccttgttgatcaaggacagtaaaggcgaaacattacgt
tcttacaatttgcctgttggttcccacttgatggttgatgacggcgagaaagtaaaagaa
ggaaaaacattggttaaaattccacgtaaatctgccaaggcaggggatattaccggtggt
cttccaagggtaaccgagcttttcgaagcacgtaacccatccaacccagccgttgtttcc
gagattgatggagtagtatccttcggtaagatcaagcgtggtaaccgagagattattatc
gagtccaagaccggagatatcaaaaagtacttggttaaattgtccaaccagattttggtt
caggaaaatgactacgtacgtgcaggtatgccattgtccgacggttccattacaccagaa
gacatcttggccattaaaggaccatctgccgtacagcaatatttggtaaacgaagtacaa
gaagtttaccgtttacaaggtgtgaaaattaacgataagcactttgaagttgttgtaaga
caaatgatgcgtaaagttaaaatccaagatccaggagataccatcttcctagagaatcaa
ttggtacacaaagacgactttatcaacgagaatgatgaaattttcggcaaaaaagttgtt
gaggatgctggggattccgaaagattgaaaccaggacagattttgactgtacgagagctg
agggacgagaactcaattctaagaagagaggacaagaccttggtaaccgcaagagatgct
gtggcagcaactgcgacaccaatcctgcaaggtattacaagagcatcgttgcagaccaag
tcctttatctcggcagcatcgttccaggaaaccaccaaagtgttgaatgaggccgcagta
agtggtaaaatcgataccttggaaggattgaaggaaaatgtaattgtaggacataaaatt
ccagccggtaccggcatgagggattatgacagcatcattgtaggttccaaagaggagtac
gatgaaatcatggcccgaaaagaggaattcaaattctaa
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