Malassezia restricta: MRET_0031
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Entry
MRET_0031 CDS
T06113
Name
(RefSeq) helicase associated domain (HA2) containing protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mrt
Malassezia restricta
Pathway
mrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_0031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_0031
03012 Translation factors [BR:
mrt03012
]
MRET_0031
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MRET_0031
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
MRET_0031
Translation factors [BR:
mrt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
MRET_0031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
dsrm
HA2_N
OB_NTP_bind
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
38736797
NCBI-ProteinID:
XP_027483058
LinkDB
All DBs
Position
I:66389..70213
Genome browser
AA seq
1274 aa
AA seq
DB search
MPHFFSIHLVQYISFLRRHNALPELLFHCNTPFRNIIARSASPAMSCDPAFNAFDSKGPQ
YNRSRSRGFERASHGRGRHSCFSKRRLSTGRASELHIHPYPIQTLDEIKARYSDLLSTAK
LQWLDNPKNVIFSYKHSRFGSYPESVTLEGRYPGGNKPVFRSTIAIDDDLGIVATGDGTS
RKEAEKAAALHGMILLLEKDYILHPPPRASNSITKVNAKVPVAALSDGTEVTLEQAREFI
DYFCHEGRFGSPDVKVDAVYNTKSYRAQLYGWKAVISISGTPVGESIESSKKAAQNTACL
NTATILANEYRDVWDQYLQVPKSKLAGKAPPVKFRVSSALEEKIRHLYDAMRDSELYSNR
PRITAAFSLRSSVAAPKRNSIQAQRTMSEEQHEEKSNQMLENLNAYQLDERVEPMRLFRQ
ALPVSQHAGDILVKIERNPVTICMASTGSGKTTQVPQLLLDDFILRKQGSRCNIICTQPR
RIAAISVAERIAKERGEALGDTVGYQVRFQSHLPKPHGSILFCTTGVLLMRLQTALKDIS
GNSFLDNVSHILMDEVHERDIETDLFLAVIRRVLQERKKRGCPEIKLVLMSATVDPKLFK
DYFEESSLTTRPVPVVNIPGRSFPVRKFYLEDIVSRLRRIPERQGGWIWREHSVQQYVHR
EIVEKGGTMGGSDNDAVDNIDMPYPLVALVIADVISRSTDGHVLVFLPGWEEIKAVHQLL
LSSKQMPMKGLDFDDQSKFEIHLLHSSVPVSDQQAVFEPLRDPMIRRIILSTNIAETSVT
IPDVVYVVDTGRVKEKRFDPEHHLSSLVMTWVGRSNLNQRAGRAGRHRPGEYYGLLSETH
HDRLGMHQTVEMKRMDLSNVVMHIKALHLPGMEVEDVLASTIEPPAPERVKPALENLERI
GALDYHSNLTALGQVLLQLPVDVYIGKMCLFGALFRCLDPALSLAAILTNRDPFVSPVYQ
RQEARVIKNSWCSTSFRSDPLCILNAYEEWSKLQRIDPNRANRFTYKNMLSRTTLFQIQQ
VKENLFTSLVKANVIQVIKNSRTFMPRYRKRVRETDPEFNVNAHSTSLLSALIAVSSPHF
AVRISQNVYRTAQDKSCFIHASSVCSAKFQPDKSKLPFVDRDIYAFSEKVHSAGQSTTLG
GATTFMRTCTHIDPLSYMLFGASEVQASSNGLECDAWLPLTGDYDALDGVERIKAVMDAC
LLRVLEGIRCSHARAPSSKLYESHALSDHDDDPDSATHPIRPLSVNEERELETFTAGIVD
MLDHYKMECYGSPM
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttcttttcgatacacctggtacaatacatatcgtttctcaggcgacataac
gcacttccagagttacttttccattgcaacacacctttccgaaacataatcgcaagaagc
gcctcccctgccatgtcttgtgatcctgcattcaatgcttttgattctaagggtccacaa
tacaataggagtcgctcgcgtgggtttgagagagcgagccatggcaggggacggcattct
tgtttcagcaagcggaggctgtccaccggccgggcaagtgagctacatattcatccctac
cctattcaaacgcttgacgagatcaaagctcgttattccgacctattatccacggccaaa
ctccaatggctagacaatcctaagaatgtcatcttttcctacaagcattcacggtttggc
tcatatcctgaaagcgtcactcttgagggtcgataccctggcggcaataaacccgttttc
cgctctactattgctattgatgacgacttgggcatcgtggccacaggcgacggtaccagc
aggaaagaggctgaaaaagccgcggcccttcatggtatgatacttcttcttgaaaaagac
tacatcttacaccctcctccccgcgcatcaaattccattaccaaggtgaatgctaaggta
cctgtcgctgctctctccgatggaaccgaagtgactctcgagcaagcgcgtgaatttatc
gattacttttgccacgaaggtcgcttcgggtctcccgatgtcaaggttgatgccgtctac
aatactaaatcatacagggcccaactgtatggctggaaggctgttatatccataagcggc
acacccgtgggagaatccatcgaatctagtaagaaggccgctcaaaatacagcttgtctg
aacacagcgaccattctcgccaacgaataccgcgacgtgtgggaccagtacctccaggtg
ccgaaaagtaagctagcaggaaaggctcctccggtcaagtttcgagtctcgagtgcattg
gaagaaaaaatacgtcacctgtacgacgcaatgcgcgacagcgagctttactccaaccgt
ccgcgaatcaccgctgctttttccttgcgttcttccgtggctgcccctaaaaggaactcg
atacaggcacagcgaaccatgtctgaggagcaacatgaagaaaagtcaaatcaaatgctc
gagaatctgaatgcctaccaattagatgaacgagtcgaaccgatgcgcctatttcgccag
gcacttcctgtttcgcaacacgcaggcgacattctagtgaaaattgagcgtaatcctgtt
acgatctgtatggcttctactggttctggtaagaccacacaggtaccacaacttcttttg
gacgattttattcttcgcaagcagggctcgcgttgcaacatcatttgtacccaaccgcgt
cgaattgctgccatcagtgttgctgaacgtattgccaaggaacgtggcgaagctttgggt
gacacagttggctatcaggtgcgtttccagagccaccttccgaagccgcacgggtctatt
ctcttctgtacaaccggtgtcttgctgatgcgcctgcagactgctttgaaagacatctct
ggtaactcctttctcgataatgtctcgcacattctcatggatgaggtgcatgaacgcgat
attgaaacagacctattcttggctgtaatcaggcgagttctgcaagagcgcaaaaagcgc
ggatgtccagagatcaagcttgttctcatgagcgcaacagttgacccaaagctattcaag
gattacttcgaagaatcttcacttaccacacgccctgtgcccgtggtcaatattccaggg
cgcagcttccctgtgcgaaagttttacttagaagacattgtatctcgcctgcgccgtatc
cccgaaaggcaaggaggatggatttggagggaacacagcgtgcaacaatatgtgcaccgc
gaaatcgtggaaaaaggcggcacgatgggaggatctgataatgatgcggtcgacaacatt
gacatgccatatccattggtcgcccttgtcattgccgatgtcatctcacgttctaccgat
ggacatgtgcttgttttcttgcctggatgggaagagatcaaagccgtgcatcaactactt
ttgtcctcgaaacaaatgccgatgaaaggactagattttgatgatcagtccaaatttgag
atccatcttttgcattcatctgtacctgtatccgatcaacaggccgtgtttgagcctttg
cgtgacccaatgatccgccgaattattttgtccacgaacattgccgaaacatcggtcact
attcccgacgtcgtgtatgtggtggacacaggtcgggttaaggaaaaacgttttgatcct
gagcatcatttatcgagtttagtgatgacctgggtgggtagatccaacctgaaccaacgt
gcgggtcgagctgggcgtcaccgcccaggtgaatactacggtctgttgtcggagacgcat
catgatcgtcttgggatgcatcaaacggttgaaatgaaacgtatggacctgagtaatgtt
gtgatgcacatcaaggcccttcacttacctggcatggaagttgaagatgtactagcttcc
accattgagccacccgctcctgagcgcgtaaagcctgcgttggaaaacctcgagcggatc
ggggctttggattaccattcgaaccttactgctcttggccaagttcttctgcagcttcca
gtggatgtgtatatcggaaaaatgtgtctctttggcgccttatttcgttgtctcgaccca
gctttatcactggccgccattctgacgaaccgtgatccctttgtatctccagtataccaa
aggcaagaagcgagggtcatcaagaacagttggtgctctacctcctttcgttcggaccct
ctatgtatcctaaatgcgtatgaagaatggagcaaactccaaaggattgatcctaatcgt
gcgaatcggtttacgtacaaaaacatgctgagtcgtaccactcttttccaaattcagcaa
gtgaaagaaaatttgttcactagcctcgttaaggccaatgttatccaggttatcaaaaac
tcgaggaccttcatgccgcgttaccgcaagcgcgtccgggagaccgaccctgaattcaat
gtcaatgcgcacagtactagccttttgtcagcactgattgccgtatcttccccccacttt
gctgtgcgcatcagccaaaatgtgtaccggacggcgcaggacaaatcatgcttcatccat
gcatcaagcgtgtgcagcgccaagttccaaccggataagtcaaagttacccttcgtggat
cgtgacatttatgccttctccgaaaaagtacacagtgcgggtcagtcgacaacgctcgga
ggtgccacaacgtttatgcgcacatgcactcacatcgatccgttgtcgtatatgcttttt
ggtgcttcagaagtgcaagcctcatcaaatggactcgaatgtgatgcatggctcccattg
acgggtgattatgacgcgctggatggcgtagaacggatcaaagctgttatggatgcatgt
ttgttgcgtgtcttggagggtattcggtgctctcatgctcgtgcaccatctagcaaactc
tatgaatcgcatgctctctcggatcatgatgacgatccagactctgctacccatcctatt
cgaccactttctgtgaacgaggaacgggaactcgagacctttaccgccggcattgtcgat
atgctggaccattacaaaatggaatgctatgggtcccctatgtaa
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