KEGG   Malassezia restricta: MRET_0033
Entry
MRET_0033         CDS       T06113                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
mrt  Malassezia restricta
Pathway
mrt03013  Nucleocytoplasmic transport
mrt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MRET_0033
  09122 Translation
   03013 Nucleocytoplasmic transport
    MRET_0033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mrt03019]
    MRET_0033
   03041 Spliceosome [BR:mrt03041]
    MRET_0033
Messenger RNA biogenesis [BR:mrt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MRET_0033
Spliceosome [BR:mrt03041]
 Complex C
  Other components
   EJC/TREX
    MRET_0033
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MRET_0033
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Tricorn_2nd Beta-prop_NOL10_N WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st DSE1_N CFAP251_N Beta-prop_SPT8 PD40 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 38736799
NCBI-ProteinID: XP_027483060
LinkDB
Position
I:join(72064..72996,73026..73223)
AA seq 376 aa
MSARLAGREAYRGVGQLEDPPTDASFFTRRHINYPPFTSARPPKELRGGHSAGVRALAWN
ATGDVLMSCGSDQLVRAWHPEKSTEVRSTTEFAGHLGQISAIACHPTNPHLFATGGIDKS
VRLWDLRVSTATKVVSTPGSNINLAYHPEGRYLAVGDKSETVSLVNADQGTFLHKIKDGS
LNREEINELAWSPDGTMLLLPMGSGTIGFLGAPHTPDAHAEAATGPHGLHPSWHCIMHHQ
AHPAAIFCIKWDPTKRVVATAAADSTVAIWDASIWDCHHIFSDFKFPARSIDFSCDGEWL
AVGGEDSHLSLLSLASGRLSHSIPVSATINTLSWHPSRPVFAYSGTDTSHSAHAGPGTAA
ARSAASSSTIWLYSVP
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtcagctcgtctcgcagggcgtgaagcgtaccgtggcgtcggtcaattggaagatcct
cctacagatgcttccttttttacgcgccgacatatcaactatccgccgttcacgtcggcc
cgcccgcccaaggaattgcgtggtgggcacagcgctggtgtgcgtgcgctcgcttggaat
gctaccggcgacgtgcttatgagctgcggcagtgaccagctggtacgcgcctggcaccct
gaaaagagtacagaggtgcgctccacgacagaattcgctggacatcttgggcagatctca
gcgatagcgtgccatcccaccaaccctcatttgtttgccacgggcggcatcgataagagt
gtgcgcctctgggatcttcgcgtttctacggctacgaaagtcgtgtcgacgccaggatcc
aatatcaacttggcgtaccacccagagggtcgttacctggccgtgggcgataagagcgaa
acggtaagtctcgtcaacgcggatcaaggcacttttcttcataagatcaaagatggatca
ctcaatcgcgaggaaatcaacgagcttgcatggtccccagacggcaccatgttattgctt
cccatgggcagtggcacgattggcttccttggtgcgccacatacccctgacgcgcacgcc
gaggctgcgacaggaccgcacggtctccaccctagctggcattgtatcatgcatcaccag
gcacatccagcggctattttctgcatcaaatgggacccaactaagcgcgtcgtggctacc
gcagctgcagatagcactgtcgctatttgggatgcctctatctgggactgccaccatatt
ttctctgactttaaatttccagcacgcagcattgacttttcttgcgacggcgaatggctc
gctgtcggtggcgaggactctcatctttctctgctatctctcgcgagcgggcgcctgtca
cactccatacccgtatcagcgaccatcaacacattatcgtggcatccgtccagacccgtg
tttgcttacagtggtacagatacctcgcattctgcccatgctggccctggtactgctgcc
gctcgctcggcggcctcttcgtccaccatatggctctatagcgtaccctaa

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