Malassezia restricta: MRET_0199
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Entry
MRET_0199 CDS
T06113
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
mrt
Malassezia restricta
Pathway
mrt03020
RNA polymerase
mrt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRET_0199
09124 Replication and repair
03420 Nucleotide excision repair
MRET_0199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_0199
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_0199
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MRET_0199
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MRET_0199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
38736965
NCBI-ProteinID:
XP_027483109
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All DBs
Position
I:complement(join(322709..322864,322899..323557,323584..323633,323671..323801))
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AA seq
331 aa
AA seq
DB search
MYATQGLAMQGHGTSSAQEKVPNVIIREINHTHADFILENCDLSLANSLRRTLIADVPTV
AIDMVEISVNTTVLPDEFLAHRLGMIPLLSMDAYKVLIDQRDCSCEDGCDRCSVELTLDA
LCTSDRGSMSVTSKDLVRSNTIANMYSDESMFGPVAPRHPDFGKPVGHDDPNANGIVIVQ
MRKGQQIKARCIARKGFAKEHAKWSPVSAVGFEYDPHNTLKHTTLWYEFDAAKEWPVSKN
AREEEPPAEGAPFDPNLRASRFYFDVESTGSLHPAEIVETGLTLLEYKTAQIVQELGMLF
QQADVNASGAAAANGVYDPYSGAPVGGASYM
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaacacaaggactagcaatgcaaggtcatggaacctcttcagcacaagaaaaa
gtgcctaatgtcattattcgtgagatcaatcacacgcatgctgattttatcttggaaaat
tgcgatctgagtcttgcaaactcgcttcgccgcacacttattgcagatgttcccacagtt
gctattgacatggtcgaaatcagtgtaaacacgacagtgttgccggatgagttccttgca
catcgcctaggcatgattccccttttgagcatggatgcctacaaagtgcttattgatcag
cgcgattgctcttgtgaggacggttgcgatcgctgctctgttgaacttacgctcgatgct
ctctgtacctcagatcgtggttcaatgtctgttacgtcgaaagatctcgtgcgaagcaat
actatcgcgaatatgtactcagatgaatctatgttcggccctgtcgcaccgcgtcaccca
gacttcggcaagccagtcggccatgatgacccaaatgctaatggtattgtgatcgtgcaa
atgcgcaaaggacagcaaatcaaggcgcggtgcattgctcgcaagggttttgccaaagaa
catgcaaagtggtctcctgtatcagctgttggttttgaatatgacccacacaacacactg
aagcatacgactttatggtatgaattcgatgcggcaaaggagtggccagtcagtaagaat
gcgcgtgaggaagagcctcctgcagagggtgcgccatttgatccaaatctacgggcttct
cgcttctacttcgatgttgaatctacaggaagtttgcatcctgccgaaattgtagaaacg
ggacttacccttctcgagtataaaacagcacagattgtgcaagagcttggcatgctattt
cagcaagctgacgttaatgcttccggagcagctgccgcaaatggcgtctatgatccgtat
agtggtgcccctgtgggaggagcgtcgtatatgtaa
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