Malassezia restricta: MRET_0203
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Entry
MRET_0203 CDS
T06113
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
mrt03015
mRNA surveillance pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_0203
09122 Translation
03013 Nucleocytoplasmic transport
MRET_0203
03015 mRNA surveillance pathway
MRET_0203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_0203
03041 Spliceosome [BR:
mrt03041
]
MRET_0203
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
MRET_0203
Spliceosome [BR:
mrt03041
]
Common components
Common spliceosomal components
Cap binding complex
MRET_0203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
38736969
NCBI-ProteinID:
XP_027482746
LinkDB
All DBs
Position
I:complement(327888..330695)
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AA seq
935 aa
AA seq
DB search
MVYDDRGQWDMKPEPPRHDGNRGWYRNRGGSRGQRRGDSRHGPSSGAYGPMDRGRMQQIE
ATRQIHQSLFHLGSDEGFQSAVEIPKVCAWLETQALEFPVAVLSAFRIMATEQPQKTALT
AAMIAHLVLKPGAHSTESGKASLGMRVMEHLIHMFGQDVDAHYWRNARLVLHVFVALAPL
GVVSSASLRRTIKAFVDVLSSDGVSRDVADPAADCVIEAMCRGGTDLIQPEPGALEPLPS
AREEMDAIVDGITLYGSQRSNAAMQLISPFRLGEPHDFLDQDGFMDRVRALQSLKEHGYV
RPAFLPSACDLLSVDVSPATSTAPAEQRTAHLPDLHVAPIRSTAYDELDDDLLAPPKRLQ
TGKGTHETVRVRTGAPSLDAAARWFGSSVPAIGSVEGVVLRGIVQDIIDLYVINRKECAH
VLLTLPQWLRRGTFGGKIPPHIGIFGDEPEPEVSVEWMLEDVLLEGALSTMLLLPRPPQL
ELYYSSLMREIVTLAPQQIAPSIGRTIRRFYVASADGVVRAEVLRRVADWFSVHLSNFKF
TWAWNEWADDMTRAWAHPRPALARRIVELEVRLAYYDRIKGTLPPDMEAYILPPFEPSPN
FVYNRPSHSYHGMAEQLFQSIKAKASVHVVQADLQSFQQSILAPATDVPDADDTHHVDSP
AEAERVARDVGIQTLLFAGSRSFSHLLNVIERYHELLRALSQSPEARVSILHSTCVFWTH
SPQWFLIVCDKLLQYRIVEPLDVVTFVFSEPSGDAVMEEASPFDVALHAPEWGNRTHRDW
SSFHWWAVLRLTMDKVIGRVNQLSRRVQDLRRVQAAPEAAASDTAQRHAPATLDEAQVHL
DAVQLEQRKVLVTILSKLVSHIQEHGGNTSLSDETDSSGWQSWWVREWYHAFVAVYYDVI
AANRETILANVFASAGTDDTCAVLFEQACALAQTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacgacgaccgtgggcaatgggatatgaagcctgagccgccacggcatgatgga
aaccgtggatggtatcgtaatcgtggtggatcgcgaggacaacgccgcggcgattcacgt
cacggcccttcgtcgggtgcgtacggtcctatggaccgtggacgcatgcagcaaatcgag
gcaacccgtcaaatccatcaatctcttttccatttaggaagcgacgagggattccagagt
gctgtagaaatcccaaaggtttgtgcatggctggagacgcaggctcttgagttcccggta
gccgtgctttctgctttcaggattatggctaccgagcaaccacaaaagacagcgctaacg
gccgctatgattgcacatctcgtgctcaaaccgggagcgcactccactgaatctggcaaa
gcatctcttggtatgcgggtgatggagcacctcatccacatgttcggccaggatgtcgac
gcacactactggcgtaatgctcgtcttgtattgcacgtgtttgtggcactagcaccgcta
ggtgttgtatcatctgcttcactgaggcgtacgatcaaagcattcgtggacgtgctatcg
agcgatggcgtatctcgcgatgtggctgacccggcagctgactgcgtcattgaggctatg
tgccgtggcggcacagatctcattcagcctgagcctggtgcgttagaacctttgccttct
gctagggaagaaatggatgccattgtagacggcattactctatacggctcgcagcgaagc
aatgctgcaatgcagctcatctcgccgttccgcctgggcgagcctcacgactttctcgac
caggatggctttatggaccgtgttcgtgccttgcaaagcttgaaggaacatggttacgtt
cgtccagcttttcttccttcagcgtgcgatctgctttccgtggatgtgtctccagcgaca
agcacagcgcctgctgaacaacgcactgctcaccttcccgacctacatgtcgctcctatc
cgcagcacggcctacgatgagctcgatgacgacctgcttgcgccccccaagcgcctgcag
acaggcaagggtacgcatgagactgtgcgtgtgcgaacgggtgccccatctctagatgca
gcagcgcgctggttcggctcgagcgtgcctgctattggctctgtggaaggagtggtgctt
cgtgggattgtgcaggatattattgatctgtacgtgatcaaccgcaaggagtgcgcacat
gtgcttcttacgcttccacagtggctgcgccgaggcacttttggcggcaagattccgcct
catatcggcatttttggcgacgagcctgagcctgaagtgtccgtggaatggatgctagag
gatgtacttctggagggtgccctctctacgatgctgcttcttcctcggccgccacagcta
gagctgtactactcgtcactgatgcgcgaaatcgtcacattggccccgcagcaaattgcg
ccctcaattggacgcacgattcgccgcttctacgtggccagtgctgacggtgtcgtgcgc
gccgaggtgctgcgtcgcgtagctgactggttcagtgttcatctcagcaacttcaagttt
acttgggcctggaacgaatgggctgacgacatgacacgggcctgggcgcatccacgtcca
gccttggcgcgccgtatcgtggagctcgaagtgagactggcatactatgaccgtatcaaa
ggcaccctgccgcccgacatggaagcgtatattctgcctccctttgagccttcaccgaat
ttcgtctacaatcggccgtcgcattcgtatcatggtatggctgagcagctatttcagtct
atcaaagctaaggccagtgtgcatgtggtccaggcagacctgcagagcttccaacagagc
attttggctcctgcaactgacgtgcctgatgctgacgatacacatcatgtcgattctccg
gcagaagcagagcgcgtcgctagggatgtgggtattcagacgctgctatttgcaggaagc
cgcagcttttcgcaccttcttaacgtaatcgagcggtaccacgagctgcttcgtgcactg
tcacagtcacctgaggcgcgtgtgtcgattctgcacagcacatgtgtcttttggacgcac
tcgccgcagtggttcttgatcgtgtgcgataagctgctgcaatatcgcattgtggagcct
ttggatgtggtcaccttcgtattctctgaaccatcgggcgatgcggtaatggaagaagcg
tctcccttcgacgtcgctttgcacgcacctgaatggggcaaccgtacacatcgtgactgg
agctcatttcattggtgggctgtgctgcgtctgactatggacaaggtgatcggtcgtgta
aatcaactttcgcggcgtgtccaggaccttcgtcgcgtacaggctgcacctgaagcagct
gcatcagacaccgcacagcgtcatgctccggcgacattagacgaagcacaagtgcatctt
gatgctgttcagctagaacagcgaaaagtgcttgtcaccatactctccaagcttgtatcg
cacatccaggagcacggtggcaatacttcgctatccgatgaaacagacagttccggttgg
cagtcgtggtgggtgcgcgaatggtaccatgcgttcgtggcagtgtactatgacgtgatc
gcagccaatcgggagaccattttggcgaacgtattcgctagcgctggcacagatgacaca
tgcgccgttctttttgaacaggcctgtgctttggcacaaactgcgtaa
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