KEGG   Malassezia restricta: MRET_0269
Entry
MRET_0269         CDS       T06113                                 
Name
(RefSeq) replication factor C subunit 2/4
  KO
K10755  replication factor C subunit 2/4
Organism
mrt  Malassezia restricta
Pathway
mrt03030  DNA replication
mrt03410  Base excision repair
mrt03420  Nucleotide excision repair
mrt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MRET_0269
   03410 Base excision repair
    MRET_0269
   03420 Nucleotide excision repair
    MRET_0269
   03430 Mismatch repair
    MRET_0269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mrt03032]
    MRET_0269
   03036 Chromosome and associated proteins [BR:mrt03036]
    MRET_0269
   03400 DNA repair and recombination proteins [BR:mrt03400]
    MRET_0269
DNA replication proteins [BR:mrt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MRET_0269
  DNA Replication Termination Factors
   ELG1-RFC complex
    MRET_0269
Chromosome and associated proteins [BR:mrt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    MRET_0269
DNA repair and recombination proteins [BR:mrt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MRET_0269
  Check point factors
   HRAD17(Rad24)-RFC complex
    MRET_0269
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_11 AAA_22 RuvB_N AAA_16 Mg_chelatase AAA_14 AAA_24 AAA_28 AAA_assoc_2 ResIII AAA_5 AAA_2 DEAD SLFN-g3_helicase AAA_7 AAA_30 DUF815 AAA_3 AAA_25 Hda_lid Viral_helicase1 nSTAND3 MCM bpMoxR RNA_helicase AAA_19 DNAX_ATPase_lid ATPase_2
Other DBs
NCBI-GeneID: 38737035
NCBI-ProteinID: XP_027483203
LinkDB
Position
I:complement(join(445244..446105,446135..446214,446241..446319,446345..446379))
AA seq 351 aa
MSVESQPWVERYRPKTIDEVSSQQHAVNVLRRSLSSANLPHMLFYGPPGTGKTSMILALA
RQLFGPELMRSRVLELNASDERGIAVVRDKIKSFARAAVSAPNPDYPSPPFKIVILDEAD
SMTQDAQSALRRIMEQYSRITRFCLICNYVSRIIDPVTSRCSKFRFKPLDASSAEARLQY
IAQAEGLRISPEVLSMLIHTSDGDMRRSITYLQSLARLVSARGNDASLMSSTTVGELAGI
VPMPVITSLAQTMAVPSYDTNDEATPTAQGSAFDAVYDAVHHIVREGYSSLQVVLQLHDY
IISHPMLSARQKTKCALHLGAADKALMDGGEESLQLLTLCLSLHQDVTNST
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtcggttgaaagccagccgtgggttgagcgatatcgacccaaaactatagatgaggtc
tcgtcacagcagcatgcagtgaatgtgctgcgtcggtccctatcgtctgccaatctccca
catatgctgttttacggaccaccaggcacgggaaagacgtcgatgattcttgctttggct
cgtcagctattcgggcctgaattgatgcgctcgcgcgttctcgagctgaatgcctcggat
gagcgtggcattgctgtagtgcgtgacaagattaaatcgttcgcacgagctgctgtctcg
gcgccgaatccagattacccgtcgcctcctttcaaaattgtgattctcgacgaagctgac
agtatgacgcaggacgctcaaagcgcattacgccgtatcatggagcagtacagtcgtatc
acccgattctgcctcatctgtaattacgtgtcgcgcatcatcgatcctgttacgtctcga
tgcagcaagttccgcttcaagccactggatgcatcgagtgccgaggcgcgtctccagtat
attgcacaagctgagggcttgcgaataagccctgaggtcttgtcgatgcttatccatacg
tctgatggtgatatgcgtcggagcattacgtacttgcagtccctggcgcgtcttgtgtcg
gcacgtggtaacgatgcaagcctcatgtcgtctacgactgtgggcgagctagccggcatt
gttccgatgcctgtgataacgtcacttgcgcaaactatggccgttccttcctacgacacg
aatgacgaggccacacctacggctcagggcagcgcattcgacgctgtgtacgatgctgtg
catcacattgtgcgcgaaggttactctagcttgcaggtggtgctgcagttacacgactat
attatttcccaccctatgctttctgcaaggcaaaagaccaaatgcgctcttcatctaggc
gctgccgacaaggccctcatggatggcggcgaggagagccttcaacttctcacgctgtgt
ctctccctccaccaagatgttacaaatagcacctaa

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