Malassezia restricta: MRET_0339
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Entry
MRET_0339 CDS
T06113
Name
(RefSeq) ATP-dependent RNA helicase DDX6/DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mrt
Malassezia restricta
Pathway
mrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_0339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_0339
03036 Chromosome and associated proteins [BR:
mrt03036
]
MRET_0339
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MRET_0339
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
MRET_0339
mRNA degradation factors
5'-3' decay
Decapping complex
MRET_0339
Chromosome and associated proteins [BR:
mrt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
MRET_0339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
38737105
NCBI-ProteinID:
XP_027482532
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All DBs
Position
I:562876..564351
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AA seq
491 aa
AA seq
DB search
MTSVAPGMEVRRLPKDTRPQTEDVTVTKGNDFEDFFLKRELLMGIFEAGFEHPSPIQEEA
IPIALSGRDILARAKNGTGKTAAYVIPTLERVNTKKNKIQAVLLVPTRELALQTSQVAKT
LGKHLGVEIMVSTGGTTLKDDILRLGQTVHILVGTPGRILDLASKGIADLSQCTTYVMDE
ADKLLSPEFTPVMEQLLGLMPKERQVMLFSATFPLIVKDFKDKHMVKPYEINLMDELTLR
GVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAK
MLQAHRNRVFHDFRNGACRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGR
FGHMGLAINLITYEDRFNLYRIEQELGTEVQPIPATIDKRLYVAPSLIEEAENRERDAKA
QGKPTQGPGIMQQGLPSIPPTQAAMHAVPMNQNANFTNTVPHRRGGRRNRRGGHAGHGNA
NGAANGAQGGA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgtagcgccaggcatggaagtgcgacggctaccaaaagatacccggccgcaa
acagaggacgtcactgtgactaaaggcaatgactttgaggactttttcttgaagcgtgaa
ttactgatgggaatttttgaagcaggattcgagcatccttcgcctattcaagaggaagcc
atccccatcgctttgtccggtcgtgacatcctagctcgtgctaagaacggcacgggtaag
accgcagcatacgttattcccactttggaacgcgtcaacacaaaaaagaacaaaatccag
gctgtgcttctggttcctacgcgcgagttggcgctgcaaacgagccaggtcgccaaaacg
cttggtaaacaccttggtgtcgaaattatggtcagcacgggtggtacgactttgaaagat
gacattctgcgtcttggtcaaacagtgcacattctggttggtacacctggtcgtattctt
gatctcgcaagtaagggcatcgcagatcttagtcaatgtacaacatatgttatggacgaa
gctgataagctactgtcacctgaatttacacctgtgatggaacagcttctgggccttatg
cccaaggaacgccaggtcatgctgttttcggcgacgtttcctctgattgttaaggacttc
aaagacaaacatatggtcaaaccgtatgaaatcaacctaatggacgagctgacactgcgt
ggtgtgacgcagtactatgcgtttgtcgaagagcgtcaaaaggtgcactgccttaacacg
ctcttttctaagcttcaaatcaatcaatcgatcattttttgcaactcgaccaaccgagta
gaattgttggctaagaaaatcacagagctgggctactcttgcttttactcacacgccaag
atgctccaagcgcatcgcaaccgcgtgttccatgatttccgaaatggtgcttgtcgtaac
ctggtgtgctcggatttgctcacccgtggtattgatattcaggctgtaaacgttgtgatc
aactttgacttccccaagaacgccgaaacctatcttcacagaattggccgtagtggtcga
ttcggtcacatgggcttggcgatcaaccttatcacgtatgaagaccgcttcaacctgtac
cgtattgagcaagagcttggcacggaagttcagcctattcctgccactattgacaagcgc
ctgtatgtggccccctctcttatcgaagaggcggaaaaccgtgaacgcgatgcgaaggct
caaggcaagcccacgcaaggcccgggtattatgcaacagggattgccgtctattccaccc
acgcaggcagccatgcacgctgttcctatgaaccagaatgccaatttcaccaacacggtg
ccgcaccgccgtggtggacgcaggaatcgtcgtggtggacacgccggccatggaaatgct
aatggcgctgcgaatggtgctcagggcggtgcttag
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