Malassezia restricta: MRET_0380
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Entry
MRET_0380 CDS
T06113
Name
(RefSeq) pre-mRNA-splicing helicase BRR2
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_0380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_0380
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MRET_0380
Spliceosome [BR:
mrt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MRET_0380
Complex C
U5 SnRNP specific factors
MRET_0380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
38737146
NCBI-ProteinID:
XP_027482947
LinkDB
All DBs
Position
I:648742..655224
Genome browser
AA seq
2160 aa
AA seq
DB search
MAPKNQRDLSGYRYSALSSLVLSAGHRQDQNEPTGEAESLVGRIDPKSMGSRVVKSQVQD
VERKRKVAESDDYGMVKKRNWNPGTAQYANVLQASAELDGLRYIPRTDETRSVYELVLTM
IQSALGDQTTEVVRSAADTAIEILKDDSVRDLDKKREMETFLGPLPEEKFSQYVNLSKQL
TDYEEDTSAHAETSTGVDDEAGVAVLFDNEEEESNPDEETYVVREASDDEDDQNSERNEA
AEEREIHDTSDLATNEEDLVLGGTAETTSSDLDVHDIDAYWLQRILNDCYSDPVESGEKT
DAALEILGAETDIRECENSLMALFDYDHFDVVQTLTKNRDIVYWCTRLSRSNEDERMDVE
VAMRERNAGWILKRLAGDAAKPALAADELEEAKRQAHRLTSRATLAPGSTAAPRLTLDLE
SMAFSEGGHLNSNPKVRLPAGSFKRSKKGYEEIHVPPPEKRSVLPEELVSVRQLPSWAHA
AFPNTTTLNPVQSKCYPVAFGSDEPMLLCAPTGAGKTNVAMLTILRELGKWRNEDTGAMD
LTECKIVYVAPMKALVAEQANHFRSRLEPFGVVVNELTGDSQLTKAQIAETHVIVTTPEK
WDVISRKSSDTSYTNLVRLLIIDEVHLLHDDRGPVLEAIVARTIRRMEQLNDPVRIVGLS
ATLPNYQDVAAFLRVNTASGLLYFESNYRPCPLRQEFIGLTETKAIKRLQLMNEVTYDKV
MEHAGKNQILIFTHSRKETAKTAKFLRDSAEAREALDVFLPQTGTSRDVLREAAEDAQDA
NLRDLLQYGFGIHHAGMTRADRELVEDLFAGRHIQVLVSTATLAWGVNLPAHTVIIKGTQ
IYNPEKSRWCELSPQDMLQMLGRAGRPQFDTVGEGIIITQYSELQYYLSLLNQQLPIESQ
FVSRLADNLNAEIVLGTIRNRDEAVTWLGYTYLYVRMLRSPALYSVSPDYTVDDPFLEQK
RADIAHSAAVLLEKAGLLRYDRRTGLFTTNELARIAAHYYLTHTSMGTYHKHLKSTSSAI
ELLRIFSYSDEFKHQIVRQDEKLEIGKLRERVPIPIKEGIDEPSAKINALLQTWISQLSL
EGYALSADMVYVTQSASRILRALVEICVVRGYARTMRYALDLAKMTERRQWGSMTPLRQF
PGVAPDLIRRLERKEFPWARLRDLEPNEMGELIGIPRAGRLLHRLVFQFPHLDLQAYFQP
LTRSLLQVHLTITPDFEWDDRIHGGAQSFWLLVEDVDGEVILFYDQFVLLRRYATDEHTV
SFTVELTDPLPPNYYISLLSDRWLHSEVRLPISFKHLILPDKFAPPTPLLDLQPQPLSVL
GAEAASLYAFDHMNKIQTQAFHALYETDESVLLGAPVGAGKTFCAELALWRLWNTGGGRA
VCILPYASMVQPRVLAWKARFPTKETVALASETSTNLRLLEQADVVVATPEQWDVLSRRW
RQRRNVQSVALYIFDDLHLLSDAYVGPTYEVVGSRARFVAAQTERPTRYIGLTAPLANAT
DVAGWLGATQTLSFAPSARPVPMEVHIQPFNVPHFPSLMIAMAKPAYLAIMEYAPSQPVL
LFVPTRKQTKLTVNDILAYALADSEYETGESPFLNMEREDLKPHLDRVQDEELAEVLTYG
IAFYHEGLSKGDRRVVERLFNAGAIQVMVASKDTVWSLPVQAHLVLLLSLQTYEGREHRY
VDYALTDMLEMVGKCTLPDEMGRSRCMLFCQANRKNYFKKFLAEGMPLESRLGTYTQDFL
NAEIVARTVQDKQGAVDMLTWTLMYRRLPKNPQAYGCQGRDMEHIGDFLSELVENTLVDL
EQSKCVAVENDMDLSPLNLGMIASFYNVSYATIDVFHLSLSGTTKLRGMLEIVSSASEFE
TVPIRRHEDVLLRRIYDRMPLKLDKIQFENPFHKTFVLLQAHFSRLTLPADLAQDQRDIL
NRVLTLLNACVDVMSSGAMLNAIVAMEISHMCVQAVWDRDSPLRQVPHFTAATIQRCQAR
GIHDVYALADVLPDMSQHERDELLQLNKRQLADVATLTNEFPYVDIEFDILDKEKLDSAS
TIILQAKLERDVDEEEEEPSDPTAIAPFYPSPKMTAWWLVIGDPGTNSLLSIKRVTIAKT
LDVRLEFMLPAGMHDKLKLYLMCDSYIGADRELEVPALHVAQGEEDEELDDEDNIEMPDA
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagaaccagcgagacctgtctgggtaccgctactcggcgttgtcctcgctg
gtgcttagtgctggtcatagacaggatcagaatgagcctacgggtgaagcagaatcgctt
gtcggccgtatcgacccgaagtcgatgggctctcgtgtcgtcaaatcacaagtacaagat
gtcgagaggaagcgtaaagtcgctgaaagtgatgactacggcatggttaaaaaacgcaac
tggaatcctggaactgcccaatatgccaatgtgctgcaggcaagcgcagagcttgatggg
cttcgatatataccgcgcacggacgagacgcgttctgtatacgagcttgttctcacaatg
atccaaagcgcgctgggtgaccaaactacagaggttgtgcgatcagcggctgataccgct
atcgagatcctcaaagatgatagtgtgcgcgatttggacaaaaagcgagaaatggagacc
tttttgggacccctacctgaagaaaagtttagccaatacgtgaacctaagcaagcaactc
acagattacgaggaagatacaagtgcccatgctgagacatctactggtgtggatgacgaa
gctggtgtggccgttctcttcgacaacgaggaagaagagagtaatccggacgaagagact
tacgtggtgcgtgaagcgtccgatgacgaggatgatcaaaatagcgaacggaatgaagct
gccgaagaaagagaaattcatgatacctctgatcttgccacgaatgaagaggacctcgtc
ctcggtggcacagcagagaccacctcttccgacttggacgtccacgatatcgatgcgtat
tggctccagcgtatcttgaatgattgctactcggatcccgttgaatcaggcgaaaagact
gacgctgctttagaaattcttggagcagagactgatatacgtgaatgtgaaaacagcctc
atggcgctttttgattatgaccactttgatgtggtacagacgctgacaaaaaatcgcgat
attgtgtattggtgtacacgtttatcgcgatcgaatgaggatgagcgcatggatgtcgaa
gttgctatgcgagagaggaatgcaggctggatcttgaagcgccttgctggtgacgcagcc
aagcccgcgctggccgcggacgaacttgaagaggctaaacgtcaggcgcaccgtcttaca
tcgcgagccacccttgctcctggatcgacggcagcgccacgcctgacgctggatctagaa
tcgatggcattcagtgaaggtgggcatttgaactccaatcccaaagtccgtcttcccgct
ggtagtttcaagcgaagtaagaaaggctacgaagaaatacacgttcccccaccagagaaa
cgctcagtgttgccagaagagcttgtatcggtcagacagttgcccagctgggcacatgct
gcctttcctaatacaacaacgctgaaccctgtacagtctaaatgctaccctgttgcattc
ggcagtgatgagcccatgttattgtgtgcacctactggtgccggaaaaacaaatgtggcg
atgttgacaatccttcgtgagctcggcaagtggcgtaatgaagacacaggtgcgatggat
ttgacagagtgcaagattgtgtatgttgcccctatgaaagcacttgtcgctgaacaagca
aaccatttccgctcacgactggaacctttcggagtggtggtcaatgagctcaccggtgat
agtcaacttacaaaggcacagattgcagagacgcatgtcattgtgaccacaccggaaaaa
tgggacgtcataagtcgaaagagctcggatacatcatatacaaatcttgtgcgacttctg
attattgatgaagtgcacttgcttcacgatgatcgcggaccggtactcgaagctattgtc
gcacgcacaatccgccgtatggagcagctgaacgaccctgtgcggattgtcggtctcagc
gctacgttgccgaattaccaggatgtcgcagcctttttgcgtgtgaatacagcaagtggc
ttgttgtactttgaatcaaattatcgaccctgtcccttacgccaggagtttatcggactg
acagagacaaaggccatcaaaaggctgcaactcatgaatgaggtgacgtacgacaaagtc
atggagcatgcgggtaagaaccagatcctcatattcacgcattcgcggaaggagacagcc
aagacagccaagttcttacgcgactcagctgaggctcgtgaggcgcttgatgtattctta
cctcaaacaggaaccagccgtgatgtccttcgtgaagctgcagaagacgcccaagacgcg
aacttgcgtgatttattgcaatatggattcggtatccaccatgcgggaatgacacgcgct
gaccgagagctggtcgaagatctatttgctggacggcatattcaggttcttgtcagtact
gctacccttgcatggggtgtgaacttgcctgcgcatacggtgatcatcaaaggtacgcag
atatacaaccccgagaagagtcgctggtgtgagctttcacctcaagatatgcttcaaatg
ctgggtcgtgccggtcggccccaatttgatacggtgggcgaaggcattattatcacgcag
tactcagaattgcagtattacctctcgcttctgaatcaacagctgccgattgaaagccaa
tttgtctcacgcttggccgataatctcaacgccgaaattgttctgggtacgatccggaac
cgcgacgaggccgtgacttggctcgggtacacgtatttgtacgttcggatgcttcgttcg
cctgcattgtacagtgtgtcaccggattatacggtggatgacccgtttcttgagcaaaag
cgggcggacatcgcacacagtgctgctgttctcttagagaaagcaggattgttgcgctac
gaccgcagaacgggcttgtttacaacgaatgagcttgcgcgaattgcggcgcactattat
ctcacgcatacatccatgggcacatatcataaacacttgaagtctacgtctagtgccatc
gaactgctgcgaatcttcagctacagcgatgaattcaagcaccagattgtgcgacaagac
gaaaagttggaaattggaaaactgcgcgaacgtgtcccgattccgatcaaagaagggatt
gatgagcccagtgccaaaatcaatgctctcctccagacatggatttctcaactctctttg
gagggctatgctctctcagcggatatggtttatgtgactcaatccgcctcacgtatttta
cgtgcgttggtcgaaatttgtgtggtccgtggatatgcacgcacgatgcggtatgctctg
gacctggccaaaatgacggagcgtcggcaatggggctccatgactccgttgcgccaattt
cccggtgttgcgccggaccttattcgtcgtctggaacgcaaagaatttccttgggcccgt
ttgcgtgaccttgagccaaatgaaatgggtgaattgattggcatacctcgtgcaggtcgt
cttttgcatcgtctcgtgttccagttccctcacctggatctacaggcatacttccaacca
ctcacgcgttccttactgcaggtgcacttgactatcacgcctgatttcgaatgggacgat
cgtattcatggcggtgcgcagagtttctggctactggtggaagacgtggatggcgaagtg
attttattctacgatcagtttgtcctgctgcgacgctacgccacggacgaacacactgtg
tccttcaccgttgagctaacagatccgcttccaccgaactactacatttcgttgctgagt
gaccgttggttgcacagtgaggttcgccttccgatttccttcaagcatcttatattgccg
gacaagttcgccccgccaacaccactgctagacttgcagccgcagcccttgtcagtgcta
ggcgctgaagcagcttcgctgtatgcatttgatcacatgaacaagatccagacgcaggca
tttcatgcattgtatgaaacagacgagagtgtgcttcttggtgcgcctgtaggagctggc
aagacgttttgtgccgagctcgcgctatggcgcttgtggaacactggtggcggacgagct
gtatgcatattgccgtacgctagcatggtccaaccacgtgtgctggcatggaaggcacgg
tttccaacaaaagagacagttgcgcttgccagtgagacgagtactaacctgcgtctactc
gaacaggccgatgttgtcgttgcgacgcccgagcaatgggatgttttgtcacgccgctgg
cgccagcgccggaatgtacaaagtgttgcgctctacatatttgacgacttgcacctgctg
agtgatgcgtacgttggtccgacgtatgaagtcgtagggtcacgagctcgttttgtggct
gctcaaacggagcgcccaactcggtatatcggtctcacggctcctctggctaatgcaacc
gatgtggctggctggctgggtgccacgcagacgctgtcatttgcacccagcgcacgacct
gtacccatggaagtgcacattcaaccattcaatgtgccacacttcccatcattaatgatc
gcgatggcaaagcctgcgtaccttgcgatcatggagtatgcgccctcacagccagtgctt
ttgtttgtaccaacgcgcaagcagaccaagctgactgtcaatgatattttggcgtacgca
cttgcggacagtgaatacgagacgggtgaatctccattcctgaatatggaacgcgaagat
ttgaagccacatctagaccgtgtacaggatgaggagcttgctgaagttctcacctacggt
atcgcattctatcacgagggcttgagtaagggcgatcgacgcgttgtcgaacgcttgttc
aatgccggagcgatccaagtgatggtagccagtaaagacacggtatggagcttgcccgtg
caagcgcatctggtactcctactctctctgcaaacgtatgagggacgtgagcaccgttat
gttgactatgcactgacagacatgctcgaaatggtaggcaagtgtactttgccggatgag
atgggtcgcagtcgatgtatgcttttttgtcaggcgaatcggaagaattactttaagaaa
ttcttggcagaaggcatgcctttggaaagccgactcggtacatatacccaagactttttg
aacgccgaaattgtggctcgaacggtgcaagacaagcaaggtgcagtcgatatgctaaca
tggacgctcatgtaccgtcgtctgccgaaaaatcctcaagcgtatggatgccaaggtcgc
gatatggagcacattggagactttttgtcagagctcgtggaaaacacactggttgatctt
gaacaaagcaaatgcgttgctgtggaaaatgacatggatttgagtcccctcaaccttggt
atgattgccagtttctacaatgtcagctatgcgaccatcgatgtgttccacctgtctctc
tcgggcactactaagctccgtggcatgcttgagatcgtgtcctcagcatcggagtttgag
actgtgcctattcgtcgccatgaagatgtgctccttcgccgcatctatgatcgaatgcca
ctcaagctcgataagatccaatttgaaaatccattccacaagacatttgttctccttcaa
gcacacttttcgcgcttgaccctgcctgcggatttggcacaggaccagcgcgacatttta
aatcgagtccttacactgcttaatgcctgtgttgatgtcatgagttcaggagctatgctt
aatgccatcgtggctatggaaatcagtcacatgtgtgtgcaagccgtgtgggaccgtgac
tcaccgctgcgccaagtgccccacttcacggctgcgacaattcaacgttgccaagcccgt
ggtattcatgacgtgtatgctcttgcggatgtcctaccagatatgagccagcatgagcgt
gatgagcttcttcagctcaacaaacggcaattggctgatgtggcaaccctgacgaatgag
ttcccatatgtcgacattgagtttgacattttagacaaagaaaagctggacagtgcctca
acgattatcctacaagccaagctcgagcgtgatgttgatgaagaagaggaggaaccatct
gatcccaccgcgattgcaccgttctacccatcgcccaagatgacagcatggtggctggtg
attggtgatcccggtacaaacagcttgctcagcatcaagcgtgtcacgattgcaaaaact
cttgatgtgcgcctcgaattcatgctaccagcaggcatgcatgacaagctaaaactatat
ctcatgtgtgacagctacattggtgcggatcgcgagttggaggtacctgctctgcatgtc
gcgcaaggcgaagaggacgaggagctcgatgacgaagataatatagagatgcccgatgct
tag
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integrated database retrieval system
