Malassezia restricta: MRET_0468
Help
Entry
MRET_0468 CDS
T06113
Name
(RefSeq) ATP-dependent RNA helicase DHX8/PRP22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_0468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_0468
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MRET_0468
Spliceosome [BR:
mrt03041
]
Complex C
Other components
Step II factors
MRET_0468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
nSTAND3
ABC_tran
GIPC1_GH2
AAA_30
SRP54
AAA_23
ATPase
TsaE
AAA_16
Motif
Other DBs
NCBI-GeneID:
38737234
NCBI-ProteinID:
XP_027483100
LinkDB
All DBs
Position
I:complement(796789..800154)
Genome browser
AA seq
1121 aa
AA seq
DB search
MDDPLYKLEYLSLVSKIATELENHLGLNDRVLAEFIISLHEQSHSSLPAFQAKLDESGAE
FSSAFVENLDRLITMLHPKLKKLRQEQAQLKDNTAEQKAQMLPGLAIQNQAWSEPDYYKE
QPQKRKRLHEEIERNRTDRHARRSPPLGQEPDTEPIVNKVYDGRVSGVKDFGAFVTLEGV
VGRRDGLVHISALSSGKGRVGHPSDVVSRGDRVKVKVVKVEGQRISLTMRDIDQGTGRDL
AAPPPRGRDPMPRFLTGSNGAPLGRPDPEPEEQRGQRLKRLTSPERWEIKQLIASGVAKA
TDYPELMEEEHSTPASRLAGDDADEEVEIEVNEKEAPFLAGQTAASLELSPVRVVKAPDG
SLNRAAQAGTALAKERRELKQQEMNEEADKKARDMSTGWLDPMAQASDKIFAQDVRGQTR
NQHAYQQPEWKKHTFNKATTFGKITTLSIKEQRESLPIFKLREPLLQAIRDNQVLVIVGE
TGSGKTTQVTQYLAEEGFADSSKIGCTQPRRVAAVSVAKRVAEEVGCRVGQEVGYTIRFE
DCTSPDTRIKYMTDGMLQRECLVDPDLKAYSVLMLDEAHERTIATDVLFGLLKKALQRRP
DLKLIVTSATLDAEKFSSYFFGCPIFTIPGRTYPVEILYTKEPEPDYLDASLITVMQIHL
SEPPGDILVFLTGQEEIDTSCEILYERMRALGPSVPELIIMPVYSALPSEMQSRIFEPAP
PGARKVVLATNIAETSITIDGIYYVVDPGFVKQNAYDARLGIDSLVVTPISQAQARQRAG
RAGRTGPGKCYRLYTEAAFRNEMLPNPIPDIQRQNLASTILALKAMGINDLLHFDFMDPP
PAQTMLTALESLYALSALDDEGLLTRLGRKMADFPMDPPMAKMLITSVDMGCSEEMLSIV
AMLSIPNVFYRPKDKQAQADAKRAKFFQPEGDHLTLLTVYNAWVSSRFSMPWCMDNFIQG
RALRRAQDVRKQLVGIMDRYHHDILSCGSNYSRVRRAICSGYFRNAAKRDPQEGYRTLAE
GGGNVYLHPSSSLFHRPPEYVVYHEVVMTSKEYMREVTAIEPKWLVEVAPRFFRMADPSH
LSKRKRQEKIQPLFNRYTKDQDDWRLSKQQRLARVLQSQTF
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggatgacccgctctacaagcttgagtatctctcgctcgtgtccaaaattgccaccgag
ctcgagaatcacttgggtctcaatgatcgcgtccttgccgaatttatcatctcgctgcat
gaacagtcgcactcatcactcccggcgttccaggctaagctggatgaatcaggcgccgag
ttttcctccgctttcgtggaaaatttggaccggctcatcacgatgctacacccaaagctg
aagaaattacggcaagagcaggcacagctgaaagacaacacagcggagcaaaaagctcaa
atgctgccaggcttggccatccagaaccaagcatggtctgagcctgactactacaaagag
cagccccaaaagagaaaacgcctccatgaagaaattgaaaggaatcgcacagaccgccat
gcacgtcgatcgcctcccttgggccaagagccggacacagagcctatcgtgaacaaagtg
tacgacggacgagtgtctggcgtcaaagactttggcgcttttgtcacgctggagggtgtc
gtgggtcgccgagacggactggtgcacattagtgcgctcagcagtggcaaaggtcgtgtg
gggcacccctcggacgttgtttcgcgtggcgatcgcgtcaaagtgaaagtcgtcaaagta
gagggacagcgcataagtttgacgatgcgtgacatcgatcagggcacgggtcgtgacctg
gcggcgccaccacctcgcgggcgagaccccatgccgcgtttccttacaggatcaaatggt
gcgcccttgggacgacccgatccagagcctgaggaacaacgtgggcagcgtctgaaacga
ttaaccagtcctgaacgctgggaaatcaagcagcttattgcaagtggcgttgcgaaagcg
acagactacccggaactcatggaggaagaacactcgactcctgcgtcacgcctcgccggt
gacgatgctgatgaagaagtggaaatcgaagtgaatgaaaaggaagcgccttttctggcg
gggcaaacagctgcttcactggaattatcgcctgtgcgcgtcgtcaaagcgcctgatggc
tcgttgaaccgtgcggcacaagcgggcacggcccttgctaaggaacgccgcgagctcaag
cagcaagagatgaacgaggaagcagacaaaaaagcgcgcgacatgtccacaggctggctt
gaccctatggcgcaagccagtgacaagatctttgctcaagatgtgcgtggccagacgcgt
aatcagcatgcctaccagcagccagagtggaaaaagcataccttcaacaaagctaccact
ttcggcaagatcaccacactcagtataaaagagcagcgcgaaagcctccctattttcaag
cttcgtgaacctctactccaggcaattcgcgataaccaggttctggtgattgtcggcgag
acaggatccggcaagacgacgcaagtgactcaatacttggcggaagaagggtttgctgat
tcgagcaaaattggatgcacgcagccgcggcgtgtcgcagccgtcagtgtagcaaagcgt
gtggccgaagaagtcggatgtcgtgttggtcaagaagtcggctacacgatccgttttgag
gattgtacaagtccagacacacgcatcaagtacatgacagatggtatgctgcagcgcgaa
tgcctcgtcgatcctgacctcaaggcgtactcagttctcatgttagacgaggcgcatgaa
cgtaccatcgccacggatgttctttttggtctgttaaaaaaggcactgcagcgtcgcccc
gatctcaaattgattgtcacttctgctactctcgacgctgagaaatttagctcctacttt
tttggatgccctatttttaccattcctggacgcacataccctgtcgagattctatatacc
aaagagcctgagcctgactatcttgatgctagtttgatcactgtgatgcagatccaccta
tccgagcctccaggtgatatcctcgtctttcttacgggccaagaggaaattgataccagc
tgtgagattctgtatgagcgcatgcgtgcgttaggtcctagtgtgccagagctcatcatc
atgccagtatattctgcccttcccagcgagatgcaatctcgcattttcgagcctgcaccg
ccaggagcccgtaaagttgtacttgccacaaacattgccgagacgagtattacaatcgat
ggaatttactatgtcgtggatccaggcttcgtcaagcaaaatgcgtacgatgcccgtctt
ggtatcgactctctcgttgtcacgcccatttctcaagcccaggctcgtcagcgtgccggc
cgggccggccgtactggtccagggaaatgctatcggctgtataccgaagcggctttccgc
aatgaaatgctgcccaacccgatcccagacatccagcgccagaacttggcgtcaacgatt
cttgctctgaaggccatgggtatcaacgatttgctgcacttcgacttcatggatccccca
ccggcgcaaactatgctcacagcgctcgaatcgctgtatgccttgtcagctcttgacgat
gaaggactccttacacgacttggtcgcaaaatggcagactttcctatggacccacccatg
gctaaaatgctgattactagcgtggatatgggctgtagtgaggaaatgcttagtatcgtt
gccatgctcagcattcctaatgtattctaccggcctaaggataaacaagcacaagcagat
gctaagcgagcgaagtttttccaacccgaaggtgaccatcttacacttttgactgtgtac
aatgcttgggtctccagccgcttttccatgccgtggtgcatggacaattttattcaaggc
cgcgctttgcgtcgtgcacaggatgtgcgaaagcagcttgtcggaattatggaccgctat
catcatgatatattgtcttgtggatctaattatagtcgcgtgcgacgcgctatttgctct
ggatatttccgcaatgcagccaagcgcgatccacaagagggctaccgcacgttggcagag
ggcggtggtaacgtatatttgcatccatctagcagtctttttcatcgtccgccggagtat
gtcgtgtatcatgaagtcgttatgacttcgaaagaatacatgcgtgaagtgacggccatt
gaaccaaaatggctcgtggaagtcgcgccgcgcttcttccgcatggcagacccatctcat
ctttcgaaacgcaaacgacaagaaaaaattcaacccctcttcaaccgatacacaaaggat
caagatgattggcgtctatccaaacagcaacgtctcgcacgtgttttgcaatctcagaca
ttttag
DBGET
integrated database retrieval system
