Malassezia restricta: MRET_0490
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Entry
MRET_0490 CDS
T06113
Name
(RefSeq) DNA topoisomerase 2-associated protein PAT1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mrt
Malassezia restricta
Pathway
mrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_0490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_0490
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MRET_0490
mRNA degradation factors
5'-3' decay
Decapping complex
MRET_0490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
38737256
NCBI-ProteinID:
XP_027482925
LinkDB
All DBs
Position
I:836376..838982
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AA seq
868 aa
AA seq
DB search
MSFFGFDTSLPADDKAAVLSSKDEERALNDKIERALAASAQEDVEVYTWGQDGYDGLGEQ
LDEANDDVNEDTFGTFAEEVGTDFDFGHAAAAPPRSDRNASAFAASLDDFWDTPALSRTT
ASVQPPMRHAPPPATLEQVEAELKSKKASAAPSADAPPPRPLTLGEVEAQLLQKRTSVNA
HPPVRPSQPPTIPPPGIVPPMVRPVPGAAGPHPGSVPMVPPMLMPPGIRPGASDVASTPL
PPPPGIRPTVPVSAPRAPQQSAAEAQAAHLARMRMMLEACPSNVQSAILSLPPPIQFDSL
EDIVRQYPSLLRGDTSDAEQASQVLTSQASERLENWKKAEDKRRAKAAKLAHMTRYNGVM
SGADKDFITRIQISQLVTSDPYTDDFYAHVFFAVRGGARKVVVPDGSVEAIQQHKNAETS
GKGAPRKLTRHENAMLRMQQQVERLVDNRKKREAKGAVSSQSGTLGRVSLVTANKPRQML
QLINQPGEAPGSHAAPAAHNQEDAVRMALQDAALGDAARAPQSATRKALTRRESLAALER
LYHLVLQLEQLRREPSTPENTAAQKQLTEALWKELRVLEPLGVSDPHPFVSLLNHVKGKK
LIPRVFRLLSAEQALAMLTMLIASFESLDAVKEFAQWEKYRVLEPMRHVRPPISAHQATD
LGRSIDAFSNSVLFQMMALINTLSLRIISGMLALLMERNHVLACARTRPGISLLSALLSR
AEALRQAANAPPAADELEQWYSVLGVLFNRLSSDGQLPSLFYSTRAASYMPFGVDMFSLG
TVPGHAPDSNAEDEPVWNFMALLAIHANLSQQQVLVQELREKILSNILAAKEAKASSLPM
PPGAEDARIRNVNLLLHALNLDAAQITL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcttcggcttcgatacgagcctgccggccgatgacaaggccgcagtgctgtca
tcgaaagacgaagaacgcgctttgaatgataagatcgagcgtgctctggctgcgagtgcg
caagaggatgtcgaagtatacacatggggccaggatggctacgatggcctaggtgaacag
ctggatgaggcgaatgacgacgtaaacgaagacacgtttggtacttttgctgaagaggta
ggaacggatttcgattttggacatgctgcggccgctcctcccagaagcgaccggaacgcc
tcggcttttgctgcatcactcgatgatttttgggatacgcctgcactgtcgcgtacaacg
gcatctgtgcagccgccaatgaggcatgcacccccacctgcgacgcttgagcaagtggaa
gcagaactcaagtcgaaaaaggcttcggcagcaccttcagctgatgcaccgccgccccga
cccctaacactgggtgaagtggaagcacagctcctgcagaagcgtacttcggtcaacgcg
catccgcctgttcgtcctagtcaacctccaacgattcccccgcccggtatagtccctccc
atggtacgtcccgtgccgggcgcagcaggtcctcatcctggttctgtgccaatggtgcca
cctatgctaatgccacctggcatcaggcctggtgcatccgatgtggcatctaccccgttg
ccgccaccgccgggaatccgtccgactgtgcccgtatcggcgccgcgggccccacagcag
tccgcggctgaggcccaggctgcacacctcgcacgtatgcgtatgatgttggaggcatgt
ccgtcgaatgtgcagtcagcgatcctgtcacttccgccacctatccaatttgattcgctg
gaagatatagtgcggcagtacccgtcgcttttacgcggcgatacgagcgacgctgagcag
gcctcccaggtgctcacaagtcaggcatccgaacgacttgagaactggaagaaggcggag
gacaagcgccgtgccaaagctgccaagctggctcatatgacgcgctacaatggtgtcatg
tcaggtgccgacaaggactttatcacccgcattcagatcagtcagctcgtgacgtcggat
ccgtacacggacgacttttacgcacatgtgttctttgctgtgcgtggcggtgcccggaaa
gtcgtggttccggatggatccgtggaggcgatccagcaacacaagaatgctgaaacaagt
ggaaagggagcgccgcgcaagttgacgcggcatgaaaatgccatgctcaggatgcagcag
caagtcgaacgccttgttgataaccgcaagaagcgcgaggcaaaaggtgctgtttcatcg
caatcaggcacgctgggccgtgtgagtcttgtaacggcaaacaagccgcgtcagatgttg
caattgatcaaccagccaggcgaggcgccaggatcacacgccgcaccggccgcacacaac
caagaagatgcggtgcgcatggcgcttcaggatgctgcgctgggtgatgctgcgcgtgca
ccgcagagtgcgacacgtaaggccttgacacgccgcgagtcgcttgcggcactggaacgt
ttgtaccaccttgtgttgcagctggagcagctacgtcgcgaaccatcgacgcccgagaat
acggcagcgcaaaagcaacttaccgaggcgctgtggaaagagttgcgcgtgttagaaccg
ctcggtgtgtcggacccacatccttttgtgagcttgctgaaccacgttaaaggcaagaag
ctcatccctcgtgtgttccgtctgctcagtgctgagcaggctcttgccatgctcaccatg
ctcattgcatcgtttgaatcgctcgatgctgtgaaggagttcgcacaatgggaaaagtat
cgtgtcttggaacctatgcgacatgtccgcccgcctatatcggcacatcaagccaccgat
ctgggccgtagtatcgacgctttctccaattcggtgctcttccagatgatggcgctcatc
aatacgctctcgttgcgcatcattagcggtatgctggcactgctgatggaacgcaatcat
gttttggcatgcgcccgtacgcgccctggtatttcgcttttgtcggcactgttgtcgcgt
gccgaggcattgcggcaggcagcgaacgctccaccggctgccgacgagctcgagcagtgg
tacagcgtgttgggcgtgctgttcaaccgtctgtcgtctgacggtcagttgccctcgctt
ttctactcaacacgcgccgcatcgtacatgccattcggcgtcgatatgttctcgctcggc
acagtcccgggacatgcaccggacagcaatgcagaagacgagccggtctggaatttcatg
gcactccttgccatccatgcaaacctatctcagcagcaggtgctggtgcaggaactgcgc
gaaaagattctctcgaatattctcgctgccaaagaagcgaaggcttcgtcccttcctatg
cctcctggcgcagaagacgcgcgtattcgcaacgtcaatttgttgctgcatgccctgaat
ctcgatgcagcacaaattacactttaa
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