Malassezia restricta: MRET_0562
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Entry
MRET_0562 CDS
T06113
Name
(RefSeq) nuclear pore complex protein Nup62
KO
K14306
nuclear pore complex protein Nup62
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MRET_0562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_0562
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MRET_0562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
ABC_tran_CTD
LTXXQ
GAS
AAA_13
Motif
Other DBs
NCBI-GeneID:
38737328
NCBI-ProteinID:
XP_027482768
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All DBs
Position
I:join(958055..958130,958164..960067)
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AA seq
659 aa
AA seq
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MSFGGGSGFSFGSSSNKPTFSFGTQNQSQGSAPAATNTTPAPGAAFGGTSTTESKPPAFS
FGGSTTPAAQPPANLFGSKPAATGSSGLFGQGNPGSQGATTTPTQAPATGGLFGAAKPAA
ATGFSFGKPAENAEAPKTGGFSFGKPAEAPKPSGFSFGKPAESTEAPKAGGFSFGKPAEN
TEAPKPSGFSFGKPAESTEAPKTGGFSFGKPAENAEAPKAGGFSFGKPAEAPKEAPKPSG
FSFGKPAESTEAPKAGGFSFGKPAENTEAPKTGGFSFGKPAEAPKEAPKPSGFSFGKPAE
NAEAPKAGGFSFGKPAENTEAPKTGGLSFGKPAEAPKEAPKPGGFSFGKPAEKKDEPATE
AKPAEAGNLFSKPPASTSGTQTDTKPTNVAVSAPSLLRGKSMEDIVKMWQGELDASIKEF
SQQAGEVAAYDRVLLKGGDEISRLVAQIAQAEERQSGIDQTLDYVEQQQTELNALLDTYE
SQRSELLQASGAHGRMDMGVADVEREKAYALAENLNTQLDDMSRNLVSMIDEVNQMSAPT
TNGRRAVRDATDASSEALGSLQVSRDVPGYEDPITQISAILNAHFSSLKWIDEHTSSLRD
RLEALRRGQTDKAHAANDTLRLSVGPDAPRSSTPSRTLLDHRGSPATFRSSTSARYLGA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggtggtggaagtgggttctcatttggatcgtcgagcaataaacccacattt
tcgtttggaacacaaaaccagagccaaggctcagcacctgctgctaccaataccaccccg
gcaccgggcgccgcttttggcggcacgtctacgaccgagtccaagccaccagccttttca
tttggcggatctacgacacctgcagcacaacctccagcgaatcttttcggctcaaaacca
gcagccactggctccagtggcctgtttggtcagggaaacccggggagccagggcgctaca
acgacacctacacaggcaccagctacaggggggttgtttggtgcagcgaaaccagcagca
gccactggcttttcatttggtaagcccgcggagaatgcagaggcgcccaagacgggcggc
ttctcctttggcaagcctgctgaggcacccaagccaagtggcttttcctttggcaagcct
gccgagagcaccgaggcacccaaggcaggtggcttctcctttggaaagcccgctgaaaac
accgaagcgcccaagccaagtggcttttcctttggtaaacctgccgagagcaccgaggcg
cccaagacaggtggtttttctttcggcaagcccgccgagaatgcagaggcgcccaaggcg
ggcggtttttcgttcggtaagcctgcagaggcgcccaaagaagcgcctaagccaagtggt
ttctcctttggcaagcctgccgagagcaccgaggcgcccaaggccggaggcttctccttt
ggaaagcccgctgaaaacacagaagcacccaagacgggcggtttttcgttcggcaagcct
gctgaggcgcccaaagaagcgcccaagccgagtggtttctcctttggcaagcctgccgag
aatgcagaggcccccaaggcaggtggtttctcttttggtaagcccgcggaaaacacagaa
gcacccaagacaggtggcctttcgtttggcaagcctgcagaggcgcccaaggaagcaccc
aagccaggcggcttctcctttggcaagcccgctgagaaaaaggatgagcccgctacagag
gcaaaacctgctgaagcgggaaatttgttcagcaagccgccggcatctacctctggaaca
cagacagataccaagcctactaatgtcgctgtgtctgcaccgtccttgttgcgtggtaag
agcatggaggacattgtaaaaatgtggcaaggtgaattggatgcatcgatcaaagagttt
agccagcaggctggcgaagtcgctgcctatgatcgcgtcctcctcaaaggcggtgatgaa
atcagccggcttgtggcgcagattgcccaggcggaagagcggcaatctggtatcgatcag
acgttggactatgtcgagcagcagcagacagaactgaatgcgttgctagacacgtatgag
agtcagcgttcagagctgctgcaggcaagtggtgcccacggacgcatggatatgggtgtt
gctgatgttgagcgcgaaaaggcgtatgctcttgctgagaacttaaatacgcagctggac
gacatgtcccgcaacctcgtgtccatgatcgatgaggtgaatcaaatgtcggcacccacg
acgaatggacgtcgggctgtgcgtgacgctactgatgcttcatccgaagcacttggatct
ttacaggtatcgcgcgatgtgccaggctacgaggacccgatcacacagatctctgcgatt
ttgaacgcgcatttcagcagcctcaagtggattgatgagcacacctcgtcactgcgtgat
cgattggaagcgttgcggcgcggccaaacagacaaggctcatgcagcgaatgacacgctg
cgtttgagtgtaggtcccgatgcaccgcgcagctcgacaccgagccgaacactcctggac
caccgtggcagccccgccacgtttcgtagcagcacgagtgctcggtacctaggcgcatga
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