Malassezia restricta: MRET_0565
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Entry
MRET_0565 CDS
T06113
Name
(RefSeq) replication factor C subunit 3/5
KO
K10756
replication factor C subunit 3/5
Organism
mrt
Malassezia restricta
Pathway
mrt03030
DNA replication
mrt03410
Base excision repair
mrt03420
Nucleotide excision repair
mrt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRET_0565
03410 Base excision repair
MRET_0565
03420 Nucleotide excision repair
MRET_0565
03430 Mismatch repair
MRET_0565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrt03032
]
MRET_0565
03036 Chromosome and associated proteins [BR:
mrt03036
]
MRET_0565
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_0565
DNA replication proteins [BR:
mrt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MRET_0565
DNA Replication Termination Factors
ELG1-RFC complex
MRET_0565
Chromosome and associated proteins [BR:
mrt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
MRET_0565
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MRET_0565
Check point factors
HRAD17(Rad24)-RFC complex
MRET_0565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
Rep_fac_C
AAA_22
AAA_16
AAA_assoc_2
Menorin
AAA_24
AAA_23
Motif
Other DBs
NCBI-GeneID:
38737331
NCBI-ProteinID:
XP_027482775
LinkDB
All DBs
Position
I:join(963228..964178,964205..964312)
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AA seq
352 aa
AA seq
DB search
MLYVDKYRPKDLSELNYHLHLTEQLESLVASADVPHLLFYGPSGAGKKTRITCLLKALYG
PGAHKLKVDQRVFLNPSKRKIEVNLISSNYHTEITPSDAGIYDRLVIQDILKEIAQTQQV
DQNAARRFKTVVINEADSLSRDAQAALRRTMEKYMRNMRLILCANSTSRIIAPIRSRCLL
LRVGAPKDEDVMRVLRHVAKREKFHLPDNISSDIARNADGNVRKAILVLETLRVQSPDLS
GPVAIAQPDWQVYCERTADMIVSEQSPARLLEVRGRLYELLVHAIPASLIFKTLAHDIVR
RVDESLRASIIEKAAFYELRCVSGNKPIFHLEAFVAQVMFLQKSLLLGMDLE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgtagacaagtaccggcccaaggacctgagtgagctgaactatcacctgcac
ctcaccgagcagctcgagagtctggtggcgagtgcagatgtgccgcatttgctgttttac
gggccgagtggtgcaggaaaaaagacgcgtattacgtgtctgctcaaggccttgtatggc
cctggtgcccacaagctcaaggtcgaccagcgtgtgtttttgaatccgagcaagcgcaag
attgaagtcaacctcattagcagcaactaccacacagagatcacgccgagtgatgcaggc
atatacgatcgcctcgttatccaggatattctcaaggaaatcgcccagacgcagcaagtc
gatcaaaatgccgcacgacgatttaaaactgtcgtgatcaacgaggcagactcgctttcg
cgcgatgctcaggccgcactgcgtcgaacgatggaaaagtatatgcgcaatatgcgcctc
attctatgtgcgaatagcacttcgcgcatcatcgcaccgattcgttcccggtgccttttg
ctgcgtgtcggtgcaccgaaagatgaagatgtgatgcgcgtccttcggcacgtcgccaag
cgcgaaaagttccacctgcccgacaacatatcgagcgacattgcacgaaacgccgatggc
aatgtgcgcaaagccatccttgtcttggagacattacgtgtgcagtctcccgatttgtct
gggcctgtggccattgcgcagccagactggcaagtgtattgtgagcgcacagccgacatg
atcgtcagtgagcagtcccctgcacggctcctggaggtgcgtggacgcctgtacgagctg
ctggtgcacgccattccggcctctctgattttcaagacactggcacacgacattgtccgc
cgagtcgatgagtcgcttcgcgcgagtattatcgaaaaagccgctttctacgaactgcga
tgtgtgtcagggaacaagcccatattccatcttgaggccttcgtggctcaggtcatgttt
ctccaaaagagcctgctcttaggcatggacctagaatag
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