Malassezia restricta: MRET_0783
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Entry
MRET_0783 CDS
T06113
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
mrt
Malassezia restricta
Pathway
mrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_0783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_0783
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MRET_0783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
38737549
NCBI-ProteinID:
XP_027483262
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Position
I:complement(1336417..1337403)
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AA seq
328 aa
AA seq
DB search
MPAGEITHPSRTEEVFLLTALRTAALRTDGRKLHQARSVSAEFSERLGWCQVHVGDTIAI
ASVNATLCEPRNDRPYEGIVQVHANLTPMAGVEYDTGGVHGATESREREALFERLLERAV
RHSEAVDREALCVLSGKVAWCVDVSVHILADQGAAMDAAVLASMLALRQYRRPEVTVENG
QVTVHSPDERVPVPLALHHVPLCVSYAIFVLVPKNGQERSLLLAQSPTLPVDQADSDMEV
DGTYTNPNVTVALLDPSLLECTLAHSNITFVMNAQREVCVLDKAGGVAIPYPTILGLLDG
AAARARQLSDFLESQLAEDSAQRVLSIR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaggtgaaattacacatccctcacgaacagaggaagtgtttctgctcacggct
ctccgaacggctgccttgcggactgatggtcgcaaattgcaccaagctcggtctgtgagt
gcagaatttagcgagcgacttggctggtgccaagtgcatgtgggtgataccattgccatt
gcttccgttaatgccactctttgtgagccacggaatgatcggccctatgaaggcattgtt
caagttcatgcgaacctcacacctatggccggcgttgagtatgacactggtggtgtgcac
ggcgccaccgagtctcgtgagcgagaagctctcttcgagcgactgctggaaagagccgtc
cgacactctgaggcggtagatcgcgaagcactgtgtgtcctgagtggcaaggtcgcttgg
tgcgttgatgtatccgttcacattctggcagaccagggtgctgccatggatgctgccgtt
ctggcgagtatgctggctctgcgacagtaccgccgtcccgaggtgactgtggagaatggc
caggtcacggtgcactcgccagatgaacgcgtacctgtacctctcgcattacatcatgtg
ccactatgtgtatcgtatgcgatttttgtactagtgccaaagaatggtcaagagcgtagc
ttgttattggcacagtctcccacactacccgtcgatcaagcagactctgatatggaagtg
gacggtacttataccaacccgaatgttactgtggcacttcttgacccatctttgctcgaa
tgcactctcgcccactcaaacatcacatttgtcatgaacgcgcaacgcgaagtgtgtgta
cttgataaagcaggtggtgtagctataccatacccaaccattctgggcctcttggacgga
gcagctgctcgtgcacgacaactgtcggactttctcgaatcccagctggctgaggattct
gctcaacgagttctctccatccggtag
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